Panicum virgatum (switchgrass): 120665684
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Entry
120665684 CDS
T07260
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2-like
KO
K03265
peptide chain release factor subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120665684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120665684
03012 Translation factors [BR:
pvir03012
]
120665684
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120665684
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120665684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
120665684
NCBI-ProteinID:
XP_039801244
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All DBs
Position
3N:complement(31304218..31308238)
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AA seq
445 aa
AA seq
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MLKHFKMGEGHEADKNIEIWRVKKLIKAVDAARGNGTSMISLIMPPRDQISRVTKMLGDE
YGTASNIKSRVNRLSVLAAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTFDFE
PFRPINASLYLCDNKFHTEALNELLASDDKFGFIVMDGNGTLYGTLSGNSREVLYKFSVD
LPKKHGRGGQSAVRFARLRMERRHNYLRKVAELATQYFINPATNQPNIVGLILAGSADFK
TELGKSEMFDPRLQAKVVKMIDVSYGGESGFNQAIEMSAEVLSDVKFVQEKKLIGKYFEE
ISQDTGKYVLGVDDTMTALEMGAVETLIVWENLDVRRYELKNSATGETVVKYLNTTQEAD
QRNFTDEATSGDLEVIDNTLLLEWFAENYHQFGCTLEFVTNKSQEGSQFCRGFGGIGGIL
RYPADVSAFQEGDELSDGEYDEDYE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacacttcaagatgggcgagggacatgaagctgacaagaacattgagatctgg
agggtcaagaaattaatcaaagcggttgatgctgctaggggcaatggcactagcatgatt
tctctcatcatgccgcctcgggaccagatttcacgtgtcactaagatgctgggtgatgag
tatggaactgcctcgaacatcaagagcagagtcaaccgtctgtctgtcttggctgccata
acctcagctcaacagaggttgaagctttacaatcgagttccccccaatggtttagtgctt
tatactggaacaattgtcactgatgatggcaaagagaagaaggtaacctttgactttgag
ccatttaggcccattaacgcttccctgtatctctgtgacaacaagttccacactgaggca
ctgaatgagctcctggcgtctgatgataaatttgggttcatcgtcatggatggcaatgga
acattgtatggcactctgagtggcaacagcagggaagttctttacaaatttagtgttgat
ctcccaaagaagcatgggcgaggagggcaatctgcagtccgttttgcccgcctgcgcatg
gagaggcgacacaattacctgcgcaaagttgctgagcttgcgacacagtacttcatcaat
cctgccaccaatcagccaaacattgttgggcttattcttgctggttctgctgacttcaag
accgaactgggaaaatcagagatgtttgatccgcgtctgcaggccaaggttgtcaagatg
attgatgtgtcttatggaggggaaagtggcttcaaccaagccattgagatgtctgccgag
gttctttctgatgtcaagtttgtccaagaaaagaagctgatcgggaagtactttgaggag
ataagccaggacacaggaaagtatgtcctcggtgtggatgacaccatgacagccctggaa
atgggagcggtagagacactgattgtgtgggaaaaccttgatgtcaggcggtatgagcta
aagaacagcgccactggagaaacagtagtgaagtatctgaacaccacacaggaggctgat
cagcgcaacttcactgatgaggcaacatccggagatcttgaggtcattgacaacacgcta
ctgctggagtggtttgctgagaactaccaccagtttggctgcacgctggagtttgtcacc
aacaagtcccaggaaggttctcagttctgccggggatttggcgggattggtgggatcctc
cgctacccagctgatgtcagtgccttccaggaaggtgatgaattgtctgacggggagtac
gacgaagactatgaatag
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