Panicum virgatum (switchgrass): 120665718
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Entry
120665718 CDS
T07260
Name
(RefSeq) ribulose bisphosphate carboxylase small chain A, chloroplastic-like
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00532
Photorespiration
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120665718
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120665718
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
120665718
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Motif
Pfam:
RuBisCO_small
RbcS
Motif
Other DBs
NCBI-GeneID:
120665718
NCBI-ProteinID:
XP_039801310
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Position
3N:32118759..32121069
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AA seq
170 aa
AA seq
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MAPTVMASSATSVAPFQGLKSTAGLPVSRRARSSGFGNVSIGGRIRCMQVWPTENNKKFE
TLSYLPPLSTEDLLKQVDYLIRNNWVPCLEFSKVGFVFRENATSPGYYDGRYWTMWKLPM
FGCTDATQVYAELEECKKAYPDNYIRILGFDNVRQVQCVMFIAYKPPAAA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaccgtgatggcctcgtcggccacctccgtggctccattccagggcctcaag
tccaccgctggcctccccgtcagccgccgcgcccgaagctccggcttcggcaatgtcagc
atcggcggaaggatcaggtgcatgcaggtgtggccgacggagaacaacaagaagttcgag
accctgtcgtacctgccgcccctctccacggaggacctcctgaagcaggtcgactacctg
atccggaacaactgggtcccctgcctcgagttcagcaaggtcggcttcgtcttccgcgag
aacgccacttcccccgggtactacgacggccgctactggaccatgtggaagctgcccatg
ttcggctgcaccgacgccacccaggtgtacgccgagctcgaggagtgcaagaaggcctac
cccgacaactacatccgcatcctcggcttcgacaacgtcaggcaggtgcagtgcgtcatg
ttcatcgcctacaagcccccggccgccgcctaa
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