Panicum virgatum (switchgrass): 120665729
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Entry
120665729 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ 49-like
KO
K09518
DnaJ homolog subfamily B member 12
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120665729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120665729
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120665729
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DnaJ
DUF1977
Motif
Other DBs
NCBI-GeneID:
120665729
NCBI-ProteinID:
XP_039801323
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Position
3N:32476301..32479780
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AA seq
365 aa
AA seq
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MDGNKDEALRSIKLAKSAFTSGDRQRAEKLVRIAQRLDPSVPLDLLSPAEKSDILNGATC
HGKTGRGQACENPKTPKESVGHVNADQVYTEENIRVVQDIRKKKDYYAVLGVERRCSVEE
IRKAYRRLSLKVHPDKNKAPGAEDAFKLVSKAFKCLSNDQSRKTYDQTGTIEDHEFNEQY
PNAMRRGMARRRTQARSGFYNYEEDFDPDEIFRSFFYGTHDNLFRAQNTYRARGTVRQQQ
QRREHTVQGGSGINLTVLMHLAVVLIIVSLAFIPVQRPEYSLQKTYYFPISKVTQKHGVE
YFVSKQDFDQKFPQGSQSREILEQYVFKDYKNLLGRYCHVERQRRQWAKDYPTPNCDRLR
NLSVA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaacaaggatgaagccttgagatctatcaagcttgcaaaatctgcattcaca
tctggggataggcagcgtgcagaaaaattagtcagaattgctcaaagattggaccctagt
gttccacttgatttgttgagcccagctgagaagtctgacatcctgaacggtgctacttgc
cacggcaaaacaggaagaggccaagcttgtgaaaaccccaaaacaccaaaagaatcagtt
ggtcatgttaatgctgatcaggtctacactgaggagaatattagagtggttcaagatatc
aggaaaaagaaggattattatgcagttcttggagtagagaggagatgctctgtggaggaa
attaggaaggcctacaggagattatcactgaaggttcatcctgacaagaataaggctcct
ggggcagaggatgcgttcaagttagtaagcaaggcgttcaagtgcctaagcaatgatcag
tcgcggaagacttatgaccagacaggaaccattgaggaccatgagtttaatgagcaatat
cccaatgccatgaggcggggaatggccaggcggaggacgcaagcaagaagtggcttctat
aactacgaagaagattttgatccagatgagatattcaggtccttcttttatggcacccat
gataatttgtttcgtgcccagaatacctacagagcaaggggaacagttaggcaacagcaa
cagagaagggagcatacagtccagggtggttctggcataaacctaacagtgttaatgcac
cttgcagtagtattgattattgtttcacttgcattcattccagtgcagaggcctgagtat
tccctgcagaagacatattacttccccatatcaaaggtcactcaaaagcatggggtggaa
tactttgtcagcaaacaagattttgatcagaagtttccacaggggagtcaatctagagag
attcttgagcagtatgtttttaaggactataagaatctgcttggaagatattgccatgtg
gaacgtcaacggcgtcaatgggctaaggactaccctacccctaactgtgacaggctaagg
aacctatctgtagcgtaa
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