Panicum virgatum (switchgrass): 120665732
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Entry
120665732 CDS
T07260
Name
(RefSeq) UDP-glucuronic acid decarboxylase 4-like
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120665732
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
120665732
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-GeneID:
120665732
NCBI-ProteinID:
XP_039801327
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All DBs
Position
3N:32552352..32556686
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AA seq
446 aa
AA seq
DB search
MASELTYRGGGASPVAGAGAGAGGYSAKPSKPLAWLPRAARYAAAEHRPVFALAGMLIAA
AVICIASPSAPSSSAAAAVSSYSSSSSTNNPLARFSVEPAHHRDLASTRHFVGGKVPLGL
KRKALRVLVTGGAGFVGSHLVDRLLERGDSVIVVDNLFTGRKDNVVHHFANPNFEMIRHD
VVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLLTSTSE
VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLQVRIARIFNTYGP
RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGDHVGPFNLG
NPGEFTMLDLAKVVQDTIDPNARIEFRQNTQDDPHKRKPDISRAKELLGWEPKIPLREGL
PLMVTDFRKRIFGDQDSAATTGNQQG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagctcacctaccgcggcggcggggcgtccccggtcgccggcgccggcgcc
ggcgcggggggatactccgcgaagccgtccaagccgcttgcgtggctgccccgcgccgcg
cgctacgccgccgccgagcaccgcccggtcttcgcgctcgccgggatgctcatcgccgcc
gccgtcatctgcatcgcctccccgtccgccccctcctcctccgccgccgccgccgtctcc
tcctactcctcctccagcagtaccaacaacccgctcgcccgcttctccgtcgagccggcg
caccaccgcgacctggcctccacgaggcacttcgtcggcggcaaggtgccgctgggtctc
aagcgcaaggcactccgcgtgctcgtcaccggcggcgccggcttcgtcggcagccacctc
gtcgaccgcctcctcgagcgcggcgacagcgtcatcgtcgtcgacaacctcttcaccggc
cgcaaggacaacgtcgtgcaccacttcgccaaccccaacttcgagatgatccgacacgac
gtcgtcgagcccatcctgctcgaggtcgaccagatctaccacctcgcctgcccggcatcg
cccgtccactacaagtacaaccccgtcaagacaatcaagaccaatgtggttgggactctg
aacatgcttggattggcaaagaggatcaacgccaggttcctcctcaccagcaccagcgag
gtctatggtgatcccctccagcacccccaggtggagacttactggggcaatgtcaatccc
atcggtgtcaggagctgttacgatgagggcaagcgtacagctgaaacgttgaccatggac
taccaccgtggtgccaaccttcaggttaggattgcgcgtatcttcaacacatatggccct
cgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcaggcacttaggaag
gagcccttgactgtttacggtgatggcaagcaaaccaggagcttccaatatgtttctgat
ctggttgagggtctgatgaagctgatggaaggggatcacgttggtccattcaaccttgga
aaccctggcgagttcaccatgcttgatctcgccaaggttgtccaggacaccattgacccg
aatgcacggattgagttccgtcaaaacacccaggatgacccgcacaagcgcaagcctgac
atcagccgcgccaaggagcttcttggctgggagccaaagatccccctgcgcgagggactt
ccccttatggtcactgacttccgcaagcgcatcttcggggaccaagacagcgctgcgacc
accggaaaccaacaaggttag
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