Panicum virgatum (switchgrass): 120665751
Help
Entry
120665751 CDS
T07260
Name
(RefSeq) phospholipase D zeta 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120665751
00565 Ether lipid metabolism
120665751
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120665751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120665751
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120665751
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120665751
Endosome - Golgi transport
Others
Others
120665751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
PH_9
PH_8
Motif
Other DBs
NCBI-GeneID:
120665751
NCBI-ProteinID:
XP_039801347
LinkDB
All DBs
Position
3N:33094064..33116041
Genome browser
AA seq
1137 aa
AA seq
DB search
MNLERLPPPAGSRHGHYRYARMPPPAGPEGEASPSDPEPEPEPERRLEVLAASASASLRV
PEAARVFDELPRASIVAVSRPDAGDITPMLLSYTIEVHYKQFRWRLYKKASQVFYLHFAL
KRREFLEEFHEKQEQVKEWLQNLGIGEHMPVVHDEDEADDVNVPPQYDDNSIRNRNVPSS
AVLPVIRPAIGRQNSISDRAKVAMQEYLNHFLGNLDIVNSQEVCKFLEVSCLSFLPEYGP
KLKEDYVSVGHLPKIQKDRKKRCCSCGLFNCCKSNWQKVWVVLKPGFLALLEDPFDPKLL
DVIIFDALPHMDINGEGQISLAKEIKERNPLHFGFQVSSGGRTIKLRTRSSSKVKDWVTA
INAARQPPEGWCYPHRFGSFAPPRGLLEDGSMAQWFIDGKAAFEAIASSIEEAKSEIFIT
GWWLCPELYLRRPFQNHGSSRLDALLEARAKQGVQIYILLYKEVALALKINSLYSKQRLL
NIHENVKVLRYPDHFSSGVYLWSHHEKIVIVDNQVCYIGGLDLCFGRYDSPEHKVTDSPP
VIWPGKDYYNPRESEPNSWEDTMKDELDRAKYPRMPWHDVQCALYGPPCRDVARHFVQRW
NYAKRNKALNEQAIPLLMPHHHMVIPHYKGRSKETNDEAEGKQYHDRDTDIRKPVLTSRT
SCQDVPLLLPQELEPQELSSADLRVTDLDIINHSDRLNKKSFNQPLLNRKAKLESSHQDL
PMRSFVDNLSSHESSSIRHFDSSKDDRNLMDKKWWEKQERGDQVASVLDIGQVGPRVACR
CQVVRSVGQWSAGTTQIEGSIHNAYFSLIEKAEHFIYIENQFFISGLSGDDTIKNRVLEA
LYRRILRAEREKKRFKAIIIIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGPNSILQN
LFDVIGPKAHDYISFYGLRAHGKLYDGGPLVTSQIYVHSKLMIVDDRITLIGSANINDRS
LLGSRDSEIAVVIEDKEVVNSKMDGRPWEAGKFSLSLRLSLWAEHLGLRPGEVSHIMDPI
DDSTFKNIWMATAKANTMMYQDVFSCVPNDLIHSRAQFRQSFAHLRDKIGHTTIDLGVAQ
EKVEAYQDHDLKGTDPMDRLQLVKGHLVSFPLDFMCQEDLRPYFSESEYYTSPQVFH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggagcgcctgccgccgccggcgggatcgcgccacggccactaccgctacgcg
cggatgccgccgccggcgggccccgagggggaggcgtcgccgtcggacccggagcccgag
cccgagcccgagcggcggctggaggtcctcgcggcctcggcctcggcgtcgctccgggtg
cccgaagcggcgcgggtgttcgacgagctgccccgggcctccatcgtcgccgtctcgcgc
cccgacgccggggacatcacgcccatgctcctctcctacaccatcgaggtccactacaag
cagtttaggtggcgtctatataagaaagcttcacaggttttctatctgcactttgcattg
aagaggcgtgaatttcttgaggaattccatgaaaagcaggagcaggtcaaagaatggctc
caaaatttgggaattggggagcacatgccagtagtacatgatgaggatgaagcagatgat
gtgaatgttccaccacaatatgacgataactccattagaaatagaaatgttccttcaagt
gctgttttgcctgtcatccgaccagctattggacgtcaaaactctatttctgatcgagca
aaagttgcaatgcaagaatatctgaaccatttcttagggaacttggatattgtcaattcg
caggaggtttgcaaatttttggaggtgtcatgtttgtcatttttacctgagtatgggcct
aagctaaaagaagactacgtttcagttggacatttgccaaagattcagaaggatcgaaaa
aagcgatgttgttcatgcggattatttaattgttgcaagagcaattggcaaaaggtctgg
gttgtcctgaagccaggattcttggctttgcttgaagatccttttgatccaaagctttta
gatgtcattatttttgatgcattgccacatatggatataaatggagaaggacagatttct
ttagcaaaagagatcaaagaacgtaacccactgcattttggattccaggtgtcttctggt
ggccggacgataaagctacgcacaagaagctcttctaaggtcaaggactgggttactgca
ataaatgctgctcgacaacctccagaaggttggtgttatcctcatcgttttggctcattt
gcgccaccgaggggtttgttggaagatgggagtatggcacaatggtttatagatgggaaa
gctgccttcgaagctattgcgtcctccattgaggaagctaaatcagagatatttattact
ggctggtggctctgcccagagttgtatcttcgacgtccattccaaaatcatgggtcatct
aggcttgatgccctactggaagcaagagctaagcagggtgtacagatttacattctctta
tacaaggaagttgctcttgcactgaagattaatagcttatacagtaagcaaaggctactt
aacattcatgaaaatgtcaaagttttgcgttaccctgatcatttctcaagtggtgtatac
ttgtggtcacaccatgagaagattgtgatagttgacaatcaagtatgttatattggaggt
cttgatctgtgctttggtcgctatgatagtcctgagcacaaagtcacagattctcctcct
gtgatatggccaggaaaggactactacaatcccagggaatctgagcccaattcttgggag
gacaccatgaaagatgagctggaccgtgctaaatatccccgcatgccttggcatgatgtt
caatgtgctctctatggtccaccttgccgtgatgtagcgaggcattttgttcagcgctgg
aattatgcaaagaggaacaaagctctaaatgagcaagcaatccccttactgatgcctcat
caccatatggtaataccacactacaagggtagaagcaaagaaacaaatgatgaggctgag
ggtaaacaatatcatgatagagatactgatattagaaagccagtcttgacatcacgcaca
tcatgtcaggatgttccattgcttctacctcaagaacttgagcctcaggaattgtccagt
gcagatttaagggtgactgatttagacattattaaccattcagatcgcttaaacaaaaag
agttttaatcagcctttgctcaaccgaaaggcaaagttggagtcttctcatcaggattta
cctatgagaagttttgtggacaatctcagttcccatgagtcatcatctattagacatttt
gattcatcgaaagatgataggaatctcatggacaagaaatggtgggaaaagcaggagcga
ggtgaccaagtagcttcagtacttgacattggacaagttggtccaagggtagcttgtcgt
tgtcaggttgttaggagtgttggtcaatggtctgctggaaccactcaaattgaagggagc
atccacaatgcctacttttctctaattgaaaaggcagaacactttatatacatagagaat
caatttttcatatcaggcctgtcaggagatgatacaataaaaaaccgtgtattagaagca
ttgtatcggcgtatacttcgagctgagagagaaaaaaagcgatttaaggccatcatcatc
atacctcttttacctggttttcagggaggcattgatgatggcggagctgcatcagtgagg
gcaatcatgcactggcaatatcggactatatgcagaggccctaattcgattcttcagaat
ctatttgatgttattgggcctaaggcacatgattacatctccttttatggtcttagagca
catggtaaactttatgatgggggtcccttggttactagtcagatttacgtacatagcaag
ctaatgatagttgatgaccgcattacattgattggctctgcaaacataaatgatagaagc
ttgcttggatcaagggattctgagattgctgtggtcatcgaagataaagaagttgttaat
tctaaaatggatggaagaccttgggaagctgggaaattctctctaagcctacgtctatct
ctgtgggcggagcaccttggccttcgtccaggagaggttagccacatcatggatcctata
gatgattcaacattcaaaaatatctggatggccactgctaaggcaaatactatgatgtac
caagatgtcttctcttgtgtacccaacgatctcatccactcaagggcccaatttcggcaa
agctttgctcacttgagggacaaaattggtcacactacaattgatttgggtgtcgcccaa
gagaaagtagaagcttaccaagaccatgatctcaaaggtactgaccctatggacagatta
cagttagtaaaggggcatcttgtttcttttcctttggatttcatgtgccaagaggacttg
agaccatatttcagtgaaagtgagtattacacatcaccacaggttttccattag
DBGET
integrated database retrieval system
