Panicum virgatum (switchgrass): 120665757
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Entry
120665757 CDS
T07260
Name
(RefSeq) DNA primase small subunit-like
KO
K02684
DNA primase small subunit [EC:
2.7.7.102
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120665757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120665757
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.102 DNA primase AEP
120665757
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
120665757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_primase_S
Motif
Other DBs
NCBI-GeneID:
120665757
NCBI-ProteinID:
XP_039801358
LinkDB
All DBs
Position
3N:33207834..33217870
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AA seq
455 aa
AA seq
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MGRDDEPVDSMEIDGQQQLKVEGPAAVPDGFNADYLRVYYGKLFPYGDFFQWLCYANDGK
HPGCDQSYVGRREFSFTLENDIYLRFQSFDSAAELESSIKEKCPFKIDIGPVYSVDPAKR
HAYAQSGNNVFVPVERELIFDIDISDYDDVRYCCSGADVCKECWPLMTIAIKILDTSLRD
DFGFNHILWVYSGRRGVHCWVCDTRARKLRNEQRAAVADYFRVYKGGENALKKVSLAGPV
LHPFLARSYTDVLESFFEDKLLLSQKLFASEERCQKILDLIPDENVASELHDKWQGNSRS
SISKEDVNAARWKQLKTTLQLGKHKAQGLRRCVEEIVFLYTYPRLDMEVSKHMNHLLKAP
FCIHPKTGRVCVPIDPNNCDDFDPTAVPTLSQLLGELNAAGFQTDSENNWERTSLEKSIR
FFRTSFLQPLLKACKEELESAYNAKLQQSKNSLNW
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgggtagggacgatgagccggttgactctatggagattgatggccagcagcagctaaag
gtagaaggccctgctgcggtgccagacgggttcaacgccgactacctccgtgtctactac
ggaaagctcttcccatatggtgatttcttccaatggctttgctatgcaaatgatggaaag
catcccggatgtgatcagtcatatgttggacgtcgagagttttcatttacactagagaat
gacatctacctgcgcttccaatcctttgatagtgctgctgaattggagagttctatcaag
gagaagtgccctttcaagattgatattggacctgtctacagcgtagatcctgcaaagcgt
catgcttacgcccaatctggcaataatgtctttgtaccagtggaaagggaactaattttt
gacattgatatatctgattatgatgatgtgcgctactgctgctctggagctgatgtctgc
aaggagtgctggcccttaatgaccattgctatcaaaattctggatacttctcttagagat
gattttggtttcaatcacatactgtgggtatacagtggccgtcgtggtgttcattgttgg
gtctgtgacaccagagctagaaagctccgcaatgaacaaagggctgcagttgctgattat
tttcgagtctacaagggtggtgaaaatgcactgaagaaagtctccttggctggacctgtc
ctccatcctttccttgcacggtcatacacggatgttcttgaaagcttctttgaagataag
ctgctacttagccaaaaactctttgcatcagaggagagatgtcagaagatacttgatctc
atccctgatgaaaatgttgctagtgagctccatgacaagtggcagggaaatagccgatct
tctatttcaaaggaagatgtcaatgcagccagatggaaacaattgaagacaaccttacag
ttaggaaagcacaaggctcagggccttcggagatgtgtggaagagatcgtcttcttgtac
acatatcctagacttgacatggaggtatcaaagcacatgaatcatttactgaaagctccc
ttttgtatacaccccaaaacaggtcgtgtttgtgttccaattgatcccaataattgcgat
gattttgatcctacagccgttccgactctatcacagcttttaggagagctcaatgctgct
ggttttcagacagattctgaaaataattgggaaagaacttccttggagaaatccatcagg
tttttcagaacttcgtttctgcaaccactgctgaaagcatgcaaggaggaactggaaagt
gcatacaatgcaaagctccaacagtccaagaattccttgaattggtaa
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