Panicum virgatum (switchgrass): 120665773
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Entry
120665773 CDS
T07260
Name
(RefSeq) cation-chloride cotransporter 1 isoform X1
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120665773
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
120665773
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Gene cluster
GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
120665773
NCBI-ProteinID:
XP_039801380
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Position
3N:33571668..33591445
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AA seq
999 aa
AA seq
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MENGGIEEADDALPVPTPLNGRRYRPVGSSDRAVIQMTSMEPGSSSAASIEAVVTPQPPR
NLKPDANLTIDPSMREGSPDDHATSGGSQGDSKLELFGFDSLVNILGLKSMTGEQIQAPS
SPRDGEDVAITIGRPKETGPKFGTMMGVFVPCLQNILGIIYYIRFTWIVGMAGVWQSLVL
VSFCGACTFLTGISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGSMY
VLGAVETFLDAVPSAGLFQKSVTVVNNTLVNGTETAGTSTISTPSLHDLQVYGVIVTILL
CFIVFGGVKIINKVAPAFLIPVLFSLLCIYLGVFIAPRHNAPKGITGLSITTFKDNWGSD
YQRTNNAGVPDPSGSIYWDFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLSATL
TTTAMYLFSVLLFGALATREELLTDRLLTATVAWPAPAVIYIGIILSTLGAALQSLTGAP
RLLAAIANDDILPVLNYFKVSEGSEPHAATLFTAFICVCCVVIGNLDLITPTITMFFLLC
YAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCVVIMFLISWSFTVVSLALASLI
YYYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENV
PCHPKLADFANCMKKKGRGMSIFVSIMDGDYHELAEDAKTACRQLDAYIDYKRCEGVAEI
IVAPTMSDGFRSIVQTMGLGNLKPNIVVMRYPEIWRRENLTQIPSTFVSIINDCIIANKA
VVIVKGLDEWPNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCISEED
TDAEELKADVKKFLYDLRMQAEVIVVTMKSWESHMESSSTGAQQDDSHEAYTSAQQRIRT
YLDEMKETAQRERQPLMENGRQVVVNEQKVDKFLYTMLKLNSTILRYSRMAAVVLVSLPP
PPLNHPSYFYMEYMDLLVENVPRMLIVRGYTRDVVTFFT
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggtgggatcgaggaggcggacgacgcgctgccggtgcccacgccgctgaac
gggcggcgataccggcctgtcgggtcgagcgaccgcgccgtcatccagatgacctccatg
gagccggggtcatcctccgccgcctccatcgaggccgtcgtgacgccccagcctccgagg
aaccttaaacctgatgctaatctaactatcgatccaagcatgcgagaaggttctcctgat
gatcatgctacatccggtggatctcaaggggattcaaagctagagctatttggttttgat
tctcttgtaaatatattgggcctcaagagcatgacaggagaacagattcaggccccttca
agtcctagggatggtgaggatgtagcaattaccattggacgccccaaggaaactggacct
aagttcggcaccatgatgggtgtctttgttccatgcttgcagaatatcttgggaatcatt
tattatatccgttttacctggattgtaggtatggcaggtgtatggcaatcgcttgtttta
gtttcattttgtggcgcttgcacatttttaactggaatatcattaagtgccattgcaact
aatggagcaatgaagggtggtgggccatattatcttataggccgtgcacttggtcctgaa
gttggagttagtattgggctatgcttcttccttgggaatgcagttgctggatccatgtat
gtgcttggggctgtagaaacttttctcgatgctgttccttctgctggacttttccaaaaa
agtgtgacagttgttaacaatacactagtaaatggtacagaaactgctggtacatctact
atttcaacacccagcttacacgatcttcaagtgtatggtgtgattgtaaccatactgcta
tgctttattgtctttggtggtgtcaaaatcatcaacaaggttgcacctgcttttttaata
ccagttctattttcgctactgtgcatctatcttggtgtcttcattgcaccaaggcataat
gctccaaagggaatcactgggttgagtataaccacatttaaagataattggggctcagat
tatcaacgtacaaacaatgctggtgttcctgatccaagtggatcaatatattgggatttc
aatgctttggtgggtctctttttcccagcagtcactggaattatggctggctcaaaccga
tctgcctcactgaaagatacacaacgttcaataccaatcggcacattatctgcaactctt
acaacaactgctatgtacctgttttctgtgcttctatttggagccttggccacaagggag
gagcttctaactgataggcttcttactgctacagtggcttggcctgctcctgcagtgatt
tacattggtattattctgtccactttaggtgcagctcttcagagtctgacaggggctcca
aggttacttgcagcaatagcgaacgatgatattcttccagttcttaattacttcaaagtt
tctgagggatctgaaccccatgcagccactttattcacagcattcatctgtgtttgctgt
gtggttattggaaacttggatctaattacacccactatcacaatgttttttcttctgtgc
tatgctggtgtgaacctgtcatgttttttgcttgacctccttgatgctcctagttggcgc
cctcgatggaaatttcaccattggagcctttcacttgttggtgcattgctttgtgttgtg
atcatgtttctgatctcatggtctttcactgttgtctcccttgcccttgcaagcctcatc
tattactatgtgagcataaaagggaaggctggagactggggggatgggttcaagagtgca
tactttcagttggcgctccgaagtctcaggtcacttggagcaaaccaagtccatcctaag
aattggtaccccattcctttgatattctgccgtccatggggtaaacttccggaaaatgtt
ccttgtcatccgaaacttgcagattttgctaattgtatgaagaagaagggccgtggtatg
tcaatttttgtctcaataatggatggtgattatcatgaactggcagaggatgccaagact
gcatgccgtcaactggatgcttacattgactacaaacgctgtgagggtgttgcggagatc
attgtggctcccactatgtctgatggtttccgtagcattgtgcagaccatgggcctagga
aacttgaagccaaacattgttgtgatgcggtaccctgagatctggcgacgtgagaatttg
acacagataccgtcaacctttgtcagcataataaatgattgcattattgctaacaaggca
gtagtcattgtgaaggggctcgatgagtggcctaatgagtaccagcgacagtacgggact
attgacctttactggattgtaagagatggaggattgatgcttcttctgtcacagctcctg
ctcacaaaggagagctttgagagctgtaagatccaagtcttctgcatatccgaagaggac
actgatgcagaggagctgaaggcggatgtcaaaaagttcttgtatgatcttaggatgcaa
gctgaggtcatcgttgtgactatgaaatcatgggaatcacacatggagagcagcagcact
ggcgctcagcaggatgactcccatgaggcttacacaagcgcacagcaaaggatcaggacg
taccttgatgagatgaaggaaactgcacaaagagaaaggcagccgctaatggagaatggg
aggcaagtcgttgtgaatgagcagaaggttgacaagttcctgtacacaatgttgaagttg
aactccacgatactcaggtactccagaatggcagccgtggtgcttgtgagcttgccccca
ccaccactaaatcatccttcgtatttctacatggagtacatggatttacttgtagagaat
gtcccacgcatgttaatagttaggggatacacaagagatgttgtcacatttttcacataa
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