KEGG   Panicum virgatum (switchgrass): 120665796
Entry
120665796         CDS       T07260                                 
Name
(RefSeq) SAGA-associated factor 11-like
  KO
K11363  SAGA-associated factor 11
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120665796
   03036 Chromosome and associated proteins [BR:pvir03036]
    120665796
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     120665796
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     120665796
    SLIK complex
     120665796
SSDB
Motif
Pfam: Sgf11
Other DBs
NCBI-GeneID: 120665796
NCBI-ProteinID: XP_039801409
LinkDB
Position
3N:complement(34236881..34242073)
AA seq 192 aa
MSSSNDAPLSPRSQLALRCFEELLDCAVADVASECHRIARLGLDRSVDAEEEELRVWAAR
AAAGGDHHHPGGFGVAEEGGAGPGGGSKGGVDVFGQTHPAIAADVIECMNCGRPVVAGRF
APHLEKCMGKGRKARAKNTRSSTAGRTRSSNGIAASSYSPYSNAANTNRVNVPNGVTDGG
CGTGGDHSSHVL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgtcgtcctccaacgacgctcccctgagccctcgatcccagctggcgctcagatgcttc
gaggagctcctcgactgtgcggtggcggacgtcgcgtcggagtgccaccgcatcgcgcgc
ctcggcctggaccgcagcgtcgacgccgaggaggaggagctccgcgtctgggccgcgcgc
gcggctgccgggggtgaccaccaccaccccggcggcttcggggtcgcagaggagggcggg
gccgggcccgggggcgggagcaagggcggggtcgacgtgttcggccagacgcaccccgcc
atcgccgccgacgtcattgagtgcatgaactgcggccgccccgtcgtcgccggccgcttc
gccccgcacctcgagaagtgcatgggcaaggggcggaaagctcgagcaaaaaatacaaga
agcagtacagctgggcggaccagaagcagcaatggcatcgctgcttcttcctactctcca
tactccaatgcagccaacactaacagggtgaacgtccctaatggcgtgactgatggtggc
tgcggcacaggtggagatcacagcagccatgtgctgtag

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