Panicum virgatum (switchgrass): 120665796
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Entry
120665796 CDS
T07260
Name
(RefSeq) SAGA-associated factor 11-like
KO
K11363
SAGA-associated factor 11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120665796
03036 Chromosome and associated proteins [BR:
pvir03036
]
120665796
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120665796
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120665796
SLIK complex
120665796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
Motif
Other DBs
NCBI-GeneID:
120665796
NCBI-ProteinID:
XP_039801409
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All DBs
Position
3N:complement(34236881..34242073)
Genome browser
AA seq
192 aa
AA seq
DB search
MSSSNDAPLSPRSQLALRCFEELLDCAVADVASECHRIARLGLDRSVDAEEEELRVWAAR
AAAGGDHHHPGGFGVAEEGGAGPGGGSKGGVDVFGQTHPAIAADVIECMNCGRPVVAGRF
APHLEKCMGKGRKARAKNTRSSTAGRTRSSNGIAASSYSPYSNAANTNRVNVPNGVTDGG
CGTGGDHSSHVL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccaacgacgctcccctgagccctcgatcccagctggcgctcagatgcttc
gaggagctcctcgactgtgcggtggcggacgtcgcgtcggagtgccaccgcatcgcgcgc
ctcggcctggaccgcagcgtcgacgccgaggaggaggagctccgcgtctgggccgcgcgc
gcggctgccgggggtgaccaccaccaccccggcggcttcggggtcgcagaggagggcggg
gccgggcccgggggcgggagcaagggcggggtcgacgtgttcggccagacgcaccccgcc
atcgccgccgacgtcattgagtgcatgaactgcggccgccccgtcgtcgccggccgcttc
gccccgcacctcgagaagtgcatgggcaaggggcggaaagctcgagcaaaaaatacaaga
agcagtacagctgggcggaccagaagcagcaatggcatcgctgcttcttcctactctcca
tactccaatgcagccaacactaacagggtgaacgtccctaatggcgtgactgatggtggc
tgcggcacaggtggagatcacagcagccatgtgctgtag
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