Panicum virgatum (switchgrass): 120665799
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Entry
120665799 CDS
T07260
Name
(RefSeq) serine--glyoxylate aminotransferase
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00260
Glycine, serine and threonine metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir04146
Peroxisome
Module
pvir_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120665799
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120665799
00260 Glycine, serine and threonine metabolism
120665799
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120665799
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120665799
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
120665799
2.6.1.45 serine---glyoxylate transaminase
120665799
2.6.1.51 serine---pyruvate transaminase
120665799
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class V
120665799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120665799
NCBI-ProteinID:
XP_039801412
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All DBs
Position
3N:complement(34292264..34295181)
Genome browser
AA seq
402 aa
AA seq
DB search
MADYVYGPGRTHLFVPGPVNIPDPVIRAMNRQNEDYRSPAVPALTKILLEDVKKIFKTTS
GTPFIIPTTGTGAWESTLTNTLSPGDRIVSFLIGQFSLLWIDQQQRLGFNVDVVESEWGR
GADLDVLEAKLRQDTAHTIKAIAIVHNETATGVTNNLATVRKLLDAYRHPALVLVDGVSS
ICALDFRMDEWGVDVALTGSQKALSMPTGLGIVCASPKALEASKTAKSLRVFFDWKDYLK
FYEMGTYWPYTPSIQLLYGLRAALDLLEEEGLDNVINRHTRLGTATRLAVEAWGLKNCTQ
KEEWFSNTVTAVVVPSYIDSGEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQL
LGCLSGVEMVLKDVGYPVKLGSGVAAAAAYLSNSTPLIPSRI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggactacgtgtacggccctgggcggacccacctgttcgtcccgggcccggtgaac
atcccggaccccgtcatccgcgccatgaaccgccagaacgaggactaccgctcgccggcc
gtgcccgccctcaccaagatcctcctcgaggacgtcaagaagatcttcaagaccacctcc
ggcacccccttcatcatcccgaccaccgggacgggcgcgtgggagagcacgctgacgaac
acgctgtcgcccggcgaccgcatcgtgtccttcctcatcgggcagttcagcctgctgtgg
atcgaccagcagcagcgcctgggcttcaacgtggacgtggtggagagcgagtggggccgg
ggcgccgacctcgacgtgctcgaggccaagctccgccaggacacggcgcacaccatcaag
gccatcgccatcgtccacaacgagaccgccaccggcgtcaccaacaacctcgccaccgtc
cgcaagctcctcgacgcgtaccggcacccagcgctggtgctggtggacggcgtgtcgtcc
atctgcgcgctggacttccgcatggacgagtggggcgtggacgtggcgctgacggggtcg
cagaaggcgctgtcgatgccgacggggttgggcatcgtgtgcgccagccccaaggcgctg
gaagccagcaagacggccaagtccctgcgcgtcttcttcgactggaaggactacctcaag
ttctacgagatgggcacctactggccctacacgccctccatccagctcctctacggcctg
cgcgccgcgctcgacctcctcgaggaggaggggctcgacaacgtcatcaacaggcacacc
cgcctcggcaccgccacccggctggccgtggaggcgtgggggctcaagaactgcacccag
aaggaggagtggttcagcaacacggtcaccgccgtcgtcgtgccctcctacatcgacagc
ggcgagatcgtcaagcacgcctggaagcggtacaacctcagcctcggcctcggcctcaac
aaggtcgccgggaaggtcttcaggattggccacctcggcaacctcaacgagctgcaactg
ctggggtgcctgagcggggtggagatggtgctcaaggacgtgggctacccggtgaagctc
ggcagcggagtggcggccgcggcggcgtacctgtcgaattcgacgcctctgatcccctcc
aggatctga
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