Panicum virgatum (switchgrass): 120665809
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Entry
120665809 CDS
T07260
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1-like isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120665809
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
120665809
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
Motif
Other DBs
NCBI-GeneID:
120665809
NCBI-ProteinID:
XP_039801422
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Position
3N:34691821..34697916
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AA seq
486 aa
AA seq
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MGCLPTIRGRKKTHRIQLQLLETENMMSTWVLMSLDEILLTNVALDLLKKVDVSTAIFAP
GWVYETKQPPDFESAQNRWWGLVEKSWGVLRSYPKQLPFYTDFDQGHGYQVSIEGQQVSS
DPWNNISCQSFQPMLKYTGDQAQLQAFINFKDGPYSGGNCMTIKGSLQQNIIFSEQLFNG
RLGMEDRSIHLFYSVRADGSSALGLSLDLSSNDQSISILVAEDIATFTRKKQNHKYGAYV
KADKAEPHAPDNQDWFLYKATVHSSAGYKLTGINIVCTLKIAGKMSPETEDRITGVNADG
SSPYHASLGHISIQKLDANTEFRPAGSWVTKGEYISWSNSSITTKHVSLKLSWKLKTPDQ
PSFRKYNIYVEESMADPNAKASRNYLGVASVDAFYISGLEVTSGVSGFNFIIQACAHDGS
WQKLEECPEFFLDLVHSEPVYLTEDSLRRMELLLVQSILVRLSPTGRRRCWRTWRRETPD
ARRHRE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtttgccaactatacgtggaaggaaaaagacccacaggattcagctgcagttg
ctggagacagaaaatatgatgtctacatgggtattgatgtctttggacgaaatacttttg
acaaatgttgcgcttgatctacttaagaaagttgatgtctcaactgccatatttgctcct
ggatgggtatatgaaactaagcaacctcccgactttgagagtgcacaaaatcgttggtgg
ggtcttgttgaaaaatcatggggagttcttcgaagctatccaaaacaattaccgttctac
acagattttgatcagggtcatggctatcaggtgtctatcgaagggcagcaagtttccagt
gatccatggaacaatatttcttgccaaagttttcagcctatgcttaagtacacaggagat
caagctcaactgcaagcctttataaatttcaaggatgggccgtacagtggagggaattgt
atgacaatcaaaggaagtctgcagcagaatattattttctcggaacagctttttaatgga
agacttggaatggaagatagatctattcatctattttattcggtaagagccgatggaagc
tctgcgttaggattgtctctggacttgtcttcaaacgatcagagtatttcaatccttgtt
gcggaggacatagcaacattcaccagaaagaaacaaaatcacaagtacggcgcatatgtt
aaagctgataaggcggagccacatgctccagataaccaagattggttcctttacaaagca
accgttcattccagtgctggctacaaattaactggaatcaacattgtttgcaccttgaaa
atagctggcaaaatgagtccagaaacagaggataggatcactggagtgaatgcagatgga
tcgtcaccgtatcatgcatcacttggccacataagtattcaaaagctcgatgcaaacaca
gagttccgaccagcaggatcatgggtaactaaaggcgagtacatctcatggtccaacagt
tctatcacaactaaacatgtgagtctgaaactcagctggaagctgaagacccctgatcaa
ccatcattcaggaagtacaacatctatgtggaggagtcaatggcagatccaaacgcgaag
gcttccagaaattaccttggtgttgctagtgttgatgccttttatatatcgggcctagag
gtcaccagcggagtttctggttttaatttcattattcaagcgtgtgcacatgatggaagc
tggcagaagcttgaggaatgcccagagttctttttagatttagttcattctgagccggtg
tatctgaccgaagattccctgagaaggatggaacttttgctggtccaaagcatccttgta
aggctttctccaacagggaggcgacgttgctggaggacgtggaggcgcgagacgccagac
gccagacgccacagagagtag
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