Panicum virgatum (switchgrass): 120665839
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Entry
120665839 CDS
T07260
Name
(RefSeq) WD repeat-containing protein GTS1-like isoform X1
KO
K24758
WD repeat-containing protein 89
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120665839
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120665839
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120665839
NCBI-ProteinID:
XP_039801453
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All DBs
Position
3N:35619277..35633128
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AA seq
409 aa
AA seq
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MDGYGEAATAAMEVEAEASPCAGLFSPETSDSPSRNPDGSVTSRRLALKNRIQTNFGDDY
VFQIASCQEISTLAVSLSSNALKFYSPATGQYLGKCKGHEGTIHEISFSVPSSPQVICSC
SSDGTVRAWDTRNFKQISLLRGGASQEMFTFSFGGSSGNLLAAGSNAQVLLWDWRNSKQV
ACLEESHMDDVTQVKFAPNQQSKLISAAVDGLVCVFDTDGDIDEDNHLLSVMNAETSVAK
VGFFGNMYQKLWCLTHIETLSVWDWNDGSRELNIEDARSLATDKWNLDHVDYFVDCHYSL
PDERLWLIAGTSAGTLGYFPVRNDPAGAIGPAEAILEGGHTGVVRTVYPAAGTHGSLGQN
RGIFGWTGGEDGRLCCWRSDEIAETNKSWISSSLVSKLQKKTKSRHQPY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatggatacggagaggcggccacggcggccatggaggtggaggccgaggccagtccg
tgcgcggggctcttctctcctgagacgtcggattccccatctcgaaaccctgatggaagc
gtgacctcgaggcggctcgccctcaagaacagaatccagaccaatttcggagatgattat
gtcttccaaattgcttcttgccaggagatctcaacactcgcagtttccttgtcatcaaat
gcgctgaagttttattctccagcaactggacaatatctggggaaatgtaaaggacatgaa
ggaactattcatgaaatctccttctcagttccatcatcaccacaagtaatctgttcttgt
tcttctgatggaactgtcagagcgtgggatacaagaaactttaagcagatctctctgcta
agaggaggcgcatcgcaagaaatgtttaccttctcctttggtggatcaagtggtaaccta
cttgctgctggctctaatgcccaggttctattgtgggattggagaaattcaaaacaagtt
gcatgcttagaggaaagccacatggatgatgtgacacaagtcaaatttgcaccaaatcaa
cagagcaaactcatttctgcagcagtggatggattagtatgtgtttttgacactgatggc
gacattgatgaggacaatcatctgctatctgttatgaatgcagaaacatctgttgccaaa
gtggggttttttgggaatatgtatcagaagctttggtgtttgacccatattgagacattg
agcgtttgggactggaatgacgggtctagagagttgaatatagaagatgctcgctccttg
gccactgataagtggaaccttgaccatgttgactactttgttgactgtcattactctctg
cctgatgaacggctatggttgattgccggcacaagtgcagggactctaggttacttccct
gtaagaaatgatcctgccggagcaattggtcccgccgaagctatccttgaaggaggccat
acaggggttgttaggaccgtgtaccctgccgcaggaacccatggcagccttgggcaaaat
aggggcatctttggatggacaggaggtgaggatggccgtctctgctgctggcgatccgac
gaaattgcagagacaaacaagtcttggatctcgagttcattagtctcgaagctgcaaaag
aaaaccaaaagccgacatcagccatactag
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