Panicum virgatum (switchgrass): 120665923
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Entry
120665923 CDS
T07260
Name
(RefSeq) putative mannan endo-1,4-beta-mannosidase 5 isoform X1
KO
K19355
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00051
Fructose and mannose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
120665923
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
120665923
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Gene cluster
GFIT
Motif
Pfam:
Cellulase
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
120665923
NCBI-ProteinID:
XP_039801577
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Position
3N:complement(38681613..38685475)
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AA seq
412 aa
AA seq
DB search
MHQASSEAIRDDQWRTVKTRGSQFVVGDRPFYVNGFNAYWLMILAADPSTRGKVTEVFQQ
AAAVGLPVCRTWGFNDGGWRALQKSPAVYDEDVFKALDFVVSEARKYRIRLILSLINNWD
CYGGKAQYVKWAGDAGLNLTSDDDFFSDQTVKGYFKNHVKNMLTRMNTYTNVTYKDDPTI
FAWEIMNELRCTSDPTGNKLQAWIREMAFHVKSIDPDHLLEVGAEGFYGPSSPARLQANP
NTYAGQVGTDFIRNHRVLGVDFASVHIYPDTWMSGASVEEQLKFAQSWMQAHIADTEGEL
GMPVVFTEFGVSTKARSTFNATSRDQFIQAVYGLLLDSTRRGGAGAGALLWQVFPEGMEY
MDDGYGIVLPKAKATAGIMSVNSKRLVVFNSRCAWSCHWGCRKGGAAAVGGC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaagctagcagcgaggcgatccgcgacgaccagtggcggacggtcaagaccagg
ggcagccagttcgtcgttggtgaccggccgttctatgtgaatggcttcaacgcatactgg
ctgatgatcctcgccgccgacccgtcgaccaggggcaaggtcaccgaggtattccagcag
gcggcggcggtcggcctcccggtgtgccgcacctggggcttcaacgacggtgggtggagg
gcgcttcagaagtcacctgctgtctatgatgaggatgtcttcaaggcgttagatttcgta
gtgagcgaggcaaggaagtacaggatcaggctgatattgtcgctgatcaacaactgggat
tgttacggcggcaaggcgcagtacgtgaaatgggccggggacgccggcctcaacctcacc
tcggacgatgacttcttctccgaccaaaccgtaaagggctacttcaagaaccacgtcaag
aacatgctgacgaggatgaacacgtacacgaacgtgacttacaaggatgacccaaccatc
ttcgcctgggagatcatgaatgaactgcgctgcacgtcggatccaaccgggaacaagctg
caggcgtggatccgagagatggctttccatgtcaagtccatcgacccggatcacctgctg
gaggtcggggccgagggcttctacggcccctcgtcgccggcacggcttcaagccaacccg
aacacctacgccggccaggtcggcaccgacttcatccgcaaccaccgagtcctgggcgtc
gacttcgcctccgttcacatctacccggacacctggatgtcgggcgcgagtgtggaggaa
cagctcaagtttgcgcagtcgtggatgcaggcgcacatcgccgacaccgagggcgagctc
ggcatgccggtggtgttcacggagttcggggtgtccaccaaggcccggagcaccttcaac
gcgacgtcgagggaccagttcatccaggcggtgtacgggttgctcctggactcgacgcgt
cgtggtggcgccggagcgggggccctgctctggcaggtgttcccggaggggatggaatac
atggacgacggctacggcattgtgctgcccaaagcgaaggccactgctgggatcatgtcg
gtgaactccaagaggctggtggtcttcaactccaggtgcgcgtggagctgccactggggg
tgcaggaaaggaggagcagcagcagtcggaggatgttga
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