Panicum virgatum (switchgrass): 120666029
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Entry
120666029 CDS
T07260
Name
(RefSeq) oxysterol-binding protein-related protein 1D-like
KO
K20456
oxysterol-binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120666029
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
120666029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
EGF_CA
Motif
Other DBs
NCBI-GeneID:
120666029
NCBI-ProteinID:
XP_039801748
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All DBs
Position
3N:complement(46431644..46441458)
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AA seq
742 aa
AA seq
DB search
MNPLCCIAPVSLEHAADHLQHHQPPPRILAATPEPAPPPPQPAAVAGVLHKWVNYGKGWR
SRYFVLEDGVLSYYKLRGAGEAAAFAAARVIGEGSALRRAREEAAAVGKLWRPFGEIHLK
VSSIRASKSDDKRLYIFSGTKTLHLRCETEEDRNAWIDALLAAKDRFPRSHTSNDLGPIA
DIMLSTEKLRVRLLQEGLGEAVVKECESIMMSEMLELHNQIKSQQQQHSILIDHLRQLET
EKVELERTVVHETKERETHGYTNGRQSDFYSVLSGGSTSESDPDTASQVAEVETEEDEVT
YFDTRDFLCAESLRSASCRRKELITNGCNGSEYVGDSVTNTVKTTKYPFVLRRDKLPEPK
EKEKPIGLWSIIKENIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDHALQWGKQGD
SLMRILHVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVAC
HCEGRGWRFWGDSNLKGKFWGRSIQLDPIGVLTLQFDDGETFQWSKVTTSIYNIIIGKIY
CDHYGTMCINGSGQYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGQKVAMLIGKWDEAMYY
VLGDPSVKPKGYDPMSEAVLLWERDKSLNQTRYNLSPFAISLNELTPHLLKKLPPTDSRL
RPDQRHLENGEYEMANAEKLRLEQLQQQARRLQEKGWKPRWFKKDDDDSYRYVGGYWEAR
EKGNWDGIPDIFGQNSASPGLP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctctgctgcatcgcgccggtctcgctcgagcacgccgcggaccacctccag
caccaccagccgccgccgcgcatcctcgcggccacgccggagccggcgccgcctccgccg
cagccggcggcggtcgcgggggtgctgcacaagtgggtcaactacgggaaggggtggcgg
tcgcgctacttcgtgctcgaggacggggtgctctcctactacaagctccgcggcgccggg
gaggcggccgcgttcgcggcggcgagggtgatcggggaggggtccgcgctgcggcgagcg
cgggaggaggccgcggcggtggggaagctgtggaggccgtttggcgagatacacctcaag
gtttcttcaattcgtgcaagcaagtctgatgataagaggctctatatattcagtgggacg
aagacgttacacctgaggtgtgaaactgaggaggacaggaacgcctggatagatgcgttg
ctggcggcgaaggatcgcttcccgcggtcgcacactagcaatgatcttggtcccatagcg
gacattatgttgtccacagagaagctgagggttcggctgctgcaggagggtttgggtgaa
gctgtggtcaaggagtgtgagtctattatgatgagtgagatgctggaactgcacaaccag
ataaagtctcagcagcagcaacattctattttgatagaccacctccggcaattggagaca
gagaaagttgagctggagagaacagttgtacatgagactaaagagagggagacacatggt
tacaccaatggcagacaaagtgatttctattcagttctatcaggaggaagtacaagtgaa
tcagatcctgacactgcaagtcaagtggctgaagttgaaactgaggaagatgaagtaaca
tacttcgatacaagagactttttatgtgcagaatctttacgaagtgcttcatgtcgaagg
aaggagcttataacaaatggatgcaatggatcagaatatgttggagattctgttacaaac
actgtcaaaactactaaatatccctttgtgctacgtagagataagctaccagagccaaag
gaaaaagagaaacctataggattatggtcaataattaaagaaaatatagggaaagatctc
tcaggtgtttgtctacccgtttatttcaatgagcctctctcttctttacaaaaatgtttt
gaagatttggagtactcttacttggttgaccatgcactacagtggggaaaacagggtgac
agcttgatgagaatacttcatgtagcagcatttgcagtatcaggttatgcttcaactgaa
ggccggcaatgcaaacccttcaatcctctactgggggaaacatacgaagctgactatcca
gataaaggacttcgctttttctctgaaaaggtgagccatcatccaatggttgttgcatgc
cactgtgaaggtagaggttggagattctggggtgattccaatctgaaagggaagttctgg
ggtcggtccattcagcttgatccaataggagttcttaccctccaatttgatgacggagaa
acatttcagtggagtaaagtgactacctccatatacaatatcataattggcaaaatttat
tgtgatcactatggcacaatgtgtatcaatgggagtggacagtactcctgcaagcttaaa
ttcaaagaacagtcgataattgatcgcaatccacaccaggtgcatggatttgtgcaagat
aatagaacagggcaaaaagtagccatgctaattggtaaatgggatgaagctatgtactat
gttcttggggatccaagtgtgaaacccaaggggtatgacccaatgtcagaagcggttctc
ttatgggagagagacaagtctcttaatcagacacgatacaacctttctccttttgcaatt
tctctaaatgaattgacacctcacttattgaagaagttgcctcctactgattctcgtttg
aggcctgatcaaaggcatctggaaaatggtgaatatgagatggcaaatgcagagaaactt
aggcttgaacaactgcaacagcaggctcggcgactgcaagagaaaggatggaaaccaagg
tggtttaagaaggacgatgacgacagctaccgctatgtgggtgggtactgggaagcaagg
gagaaggggaactgggacggcatcccggacatcttcggccagaacagtgcatctccaggg
ttgccgtag
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