Panicum virgatum (switchgrass): 120666037
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Entry
120666037 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120666037
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120666037
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120666037
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
Sina_RING
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120666037
NCBI-ProteinID:
XP_039801757
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Position
3N:complement(46662327..46675215)
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AA seq
541 aa
AA seq
DB search
MSGFLVVVGKIGTFLLWVLFLVLQTATRIVGNLLAGPAEQQEDPLQESAAAARRRSPTAS
PRRDPYEPASAPPQQLWDSPLLPYSPSAPAADEYSSSSSFRRRSAPPPPPAEDVVVSSSA
YSRPPPAAAHAYSLSAPPLRAIETRAMPARAVAAGGKRPRLERKYSKIVDQYRSLDEVIE
ALAQAGLESSNLIIGIDFTKSNEWTGKNSFNGTSLHHIGDTPNPYEQAISIIGQTLSAFD
EDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEALARYREIVPHLRLSGPTSFAPIIE
MATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASEFPLSIILVG
VGDGPWDMMKEFDDNIPARSFDNFQFVNFTAIMSKKISQSKKETEFALSALMEIPLQYKA
TLELGILGRRLAKSPDRVPLPPPFASYSTVSRAPPSRANSYRSVPSRPREEPTVDSTITA
SVTSPPAVESRVSEPQMCPVCLSKPRDMAFGCGHQTCSECGPQVADCPICRRPIDTRVKL
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcttcttggtggtggtcggcaagatcggcaccttcctgctttgggtgctcttc
ctggtgctgcaaacggccacccggatcgtcggcaacctcctcgcggggccagccgagcag
caggaggacccgctgcaagagtcggcggcggcagcgcgccgcaggtcgccgacagcctcg
ccgcgccgcgacccctacgagccggcgtcggcgccgcctcagcagctctgggactcgcct
ctgctgccgtattctccctctgctcccgccgcggatgagtactcctcgtcctcgagcttc
cggcggcgtagcgcgccgccgccgccgccggctgaggacgtagtggtgtcctcgagtgcc
tactcgcgtccgccgccggcggcggcccatgcatattccttgtcggcgcctccgctgagg
gcaatcgagacgcgggcgatgccagcgagggcggtggcagctgggggtaagcggcccagg
ctggagaggaagtactccaagattgttgaccagtaccgctccctggatgaggttatcgaa
gcattagcacaagctggtctggagtcttccaatttaatcataggaattgatttcacaaaa
agtaatgaatggacaggaaagaattccttcaatggtacgagcctgcatcatattggtgac
accccaaatccttatgaacaggcaatatcgatcattgggcagaccttatcagcttttgac
gaggataatttaattccttgctatggttttggagatgcatctacacatgaccaagatgta
tttgccttttatcctgatgaaagaccatgcaatggttttcaggaagctttagctcgatac
agagagattgttcctcaccttcgcctttctggtcctacatcattcgctccaataattgaa
atggccacaaccattgttgagcaaagtggtggccaataccatgttttagtaatcatcgct
gatgggcaggtgacacgaagtgtagataccgaatttggtcagttaagtacccaggagcaa
atgacagttgatgctattgtacaagccagcgaatttcccttgtctataattctcgttgga
gttggagatggtccatgggatatgatgaaggagtttgatgacaacataccagctaggtct
tttgacaatttccagtttgtcaacttcactgcgatcatgtcaaaaaagataagtcaaagc
aaaaaggagacagagtttgccctttcagcactcatggaaattccgttgcagtacaaagca
acattagagcttggaattttaggacggcgacttgcaaagtcgcctgatcgagttccactt
cctcctccctttgcaagttatagcacagtttcaagagcaccaccatctcgagcaaatagc
taccgaagcgtgccttcacgtcctagagaggagccaactgtagattcaacaatcacagca
tcagtcacatccccaccagcagttgaaagtagagtttcagaaccccagatgtgcccagtt
tgcctttccaaaccccgggacatggcatttggttgtggccaccagacatgctcggaatgt
ggaccacaagtcgcagattgtccaatctgtcgaaggcccattgatacgagagtaaaattg
tactag
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