Panicum virgatum (switchgrass): 120666109
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Entry
120666109 CDS
T07260
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120666109
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120666109
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120666109
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
120666109
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120666109
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120666109
Prokaryotic type
120666109
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GFIT
Motif
Pfam:
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
120666109
NCBI-ProteinID:
XP_039801833
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All DBs
Position
3N:50085004..50092603
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AA seq
509 aa
AA seq
DB search
MSSSGGKGAKGGGGGKKKEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYI
LRPWAMEIWELLKEFFDAEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSG
KSELEAPIAIRPTSETVMYPYFSKWIRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSREFL
WQEGHTAFATKEEADEEVLQILELYRRIYEEFLAVPVSKGRKSEMEKFAGGLYTTSVEAF
IPNTGRGIQGATSHCLGQNFAKMFDITFENEKGAREMVWQNSWAYTTRSIGVMVMTHGDD
KGLVLPPRVAPIQIIVIPVPYKDADTTAIKGACESAVYTLNESGFRADLDTRENYSPGWK
YSHWEMKGVPLRIEIGPKDLANQQVRVVRRDNGAKVDIPVANLVKEIKALLDEIQGNLLK
TAKEKRDACIEVIHTWDEFTTALNNKRLILAPWCDEEEVEKDVKARTKGDLGAAKTLCTP
FDQPELPEGTLCFASGKPAKKWSFWGRSY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagcggaggcaagggcgccaagggcggcggaggggggaagaagaaggaagtt
aagaaggagacgaagctcgggatggcgtacaagaaggacgacaacttcggggagtggtac
tccgaggtggttgttaacagtgaaatgattgagtactatgacatctcgggttgttatata
ttgaggccatgggcgatggaaatctgggagctgctgaaagaattctttgatgcagaaatt
aaaaagctgaagctcaaaccatattatttccctttgtttgttactgagaatgttctacag
aaggagaaggaccacattgagggctttgcacctgaggtagcttgggttactaaatcaggg
aaatctgaactggaagctcctatcgcaatccgccccacaagtgagactgtcatgtatcca
tacttctctaaatggataagaagccaccgtgacttacctttgaggtgtaaccagtggtgt
aatgttgttagatgggagtttagcaatcctactcctttcataaggagccgtgagtttctg
tggcaagaagggcatacagcttttgcaactaaagaagaggcagatgaagaggttctccaa
atactggaactgtacagaaggatatacgaagaatttttagcagttccagtgtccaaaggg
aggaaaagtgagatggaaaaatttgcaggtggactctataccaccagtgttgaggctttc
attccaaacactggtcgtggtatacaaggtgcaacctcacattgtcttggccaaaacttc
gccaagatgtttgatatcacttttgagaatgagaaaggtgcaagggaaatggtttggcaa
aactcttgggcatatacaactcgctcgattggagtgatggtgatgacacatggtgatgac
aaaggcttagtattaccaccaagggtggcaccaatccagataattgtgattccagtgcct
tacaaggatgctgacacaactgccataaagggggcatgtgaatcagctgtctacactctc
aatgagtctggattccgagcggatttggatacccgtgaaaattactctccaggttggaag
tattctcactgggaaatgaaaggcgttcctttgagaattgagattgggccaaaagatctg
gccaaccaacaggtgcgtgttgtccgccgagacaatggtgcaaaggttgatattcctgtg
gccaatttagttaaggagattaaagcattgcttgatgagatccaaggaaacctgctcaaa
acagccaaagaaaagagagatgcctgcattgaagtcatccacacctgggatgaattcaca
actgctctgaacaacaaaaggttgatcttggctccatggtgtgatgaggaggaagttgag
aaagatgtgaaagctcggaccaagggggacctcggagctgcgaaaacattgtgtactcca
ttcgatcagccagaacttccagaaggaaccctgtgcttcgcctctggaaagccagcaaag
aagtggtcgttctggggccgcagctactga
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