Panicum virgatum (switchgrass): 120666126
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Entry
120666126 CDS
T07260
Name
(RefSeq) iron-sulfur cluster co-chaperone protein HscB homolog
KO
K04082
molecular chaperone HscB
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120666126
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120666126
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120666126
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
120666126
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSCB_C
DnaJ
GatZ_KbaZ-like
WIYLD
Motif
Other DBs
NCBI-GeneID:
120666126
NCBI-ProteinID:
XP_039801851
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Position
3N:complement(50913500..50916351)
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AA seq
256 aa
AA seq
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MWRRGAGLLRLHLAAAASTRPAQRAPAPLVPAAPSLSTASSSCRQIFGIFRGSIGAPSRC
LSNQAGGGGACWSCAATGAFLSCGSCGSVQPVDPAIDYFQIFGLKREYNIKDNNLEGRYK
KWQKKLHPDLVHSKTKKERGYAAEQSALVIDAYRTLSKPLSRALYLLKLEGIHVDEEKTI
NDPELLMEMMEIREAVNDASGSQTLEKIQSQVKKKLEIWSRSFEDAFHKKDFDRAIEATQ
RMRYYERAVEETVKKL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgccgcggagccggactgctccgtctccacctcgctgccgccgcctctacccgt
cccgcgcagcgagccccggcgccccttgtacccgccgccccatctctctcgaccgcctct
tcctcctgccgccagatttttggaatcttccggggttccatcggggcgccctctcggtgc
ctgtcgaaccaggcgggcggcggcggcgcttgctggagctgcgccgcgacgggggcgttc
ctgtcttgcgggtcctgcgggagcgtgcagcccgtcgaccccgccattgactacttccaa
atctttggcctaaaaagagaatacaacataaaggataataacttggaaggaaggtacaag
aagtggcaaaagaaattacatcctgacctggttcactcaaaaactaagaaagagagaggc
tatgctgcggagcaatcagcgcttgttattgatgcgtatcgcacacttagcaaaccttta
tcaagggcattatacttgttaaaacttgagggaatacatgtagatgaagaaaaaactatc
aatgacccagaacttcttatggagatgatggagatacgtgaagctgttaatgatgccagt
ggttctcaaaccctggagaagatccaatctcaggttaagaaaaagctcgaaatctggtcc
cgttcctttgaggatgcatttcacaagaaggattttgaccgtgcaatagaagcaacacag
aggatgaggtactatgaacgtgcagtggaagaaacagtgaagaagctatga
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