Panicum virgatum (switchgrass): 120666178
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Entry
120666178 CDS
T07260
Name
(RefSeq) auxin response factor 24-like isoform X1
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120666178
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
GH43_C2
Motif
Other DBs
NCBI-GeneID:
120666178
NCBI-ProteinID:
XP_039801899
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Position
3N:53587146..53593445
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AA seq
810 aa
AA seq
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MAAAAAGGGGGGGGPEAAGGGGGGGKDALFVELWKACAGPLSSVPPLGEKVYYFPQGHIE
QVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKAEPDTDEVYAQLTLLPDKKRDENTTT
TVESDDPEEEEVPNAPPATNEQLRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLVRT
LEPLTHVFIVGLMIVIPLMLLLDQDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRHLL
QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLAT
AWHAVNTGSMFTIYYKPRTSPAEFMVSRDKYYESLKRNYSIGMRFKMRFEGEEAAEQKFT
GTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSAWQIEPAVSPSPVNPLPPRFK
RSRSNVNASPPIMPNVTREVASKVMPDSQQNSLPRAMHSQGRTQLTSQYRDSSDLKSAQD
LTMWSKGIEQERNNISAQTKLSLEGWTQTRRPEGYNQPLSAFQPLKDAQNPLCSFPSQLS
GNRSRNWDTIDSHYPVQQANHNMSPGTLSLMPHNNGFRMDQQMNLSMPGAPHPQRAEIAK
FSGKSAFTPLQGHGIDQCSSDWFGHIKPQPLVIENDGQKTKGTSFKLFGFPLGSLEKSEP
LVSPPSVAYDGKQTSPSERNQLGIIEVHKQGSALGRSIDLTTFTCYDELIAELDQMFDFD
GELSSPQKNWLVVYTDNEGDMMLVGDDPWNEFCNMVHKISIYTREEVEKMNPGALNSRPE
DSLSDSLGRGLGSKEAPGGPSTSYLNSENH
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcggctgccggcggcggcggcggagggggaggtccggaagcagcaggcggc
ggcggcggcggagggaaggacgcgcttttcgtggagctctggaaggcctgcgcggggccg
ctctccagcgtcccgccgctcggggagaaggtctactacttcccgcaggggcacatcgag
caggtggaggcatcgacgaaccagctcgccgagcagcagggcacgccgctctacaacctg
ccatggaagatcccctgcaagctcatgaacatagagctgaaggctgagccggatactgat
gaggtgtatgcccagctcaccctgctccctgataagaagcgagatgagaataccactaca
acagtggagagtgatgacccagaggaggaggaggtgcctaatgcgccgccagccaccaat
gagcagcttcgcatccattccttctgcaagacactaactgcctcagacacaagcacacat
ggtggattctcggtgttgcgccggcatgcggatgagtgcctccctcccctggttaggacc
ttggaacctttgactcatgtttttattgttggtctaatgatagtgatccctttgatgttg
ctccttgaccaggatatgagtcagcatcccccaaatcaagagctagtagccaaggacctg
catggggttgagtggcgctttcgtcacatctttcgaggtcagccacggaggcaccttctt
cagagtggttggagtgtttttgttagtgccaagcgtctcgttgctggggatgccttcata
tttctcagaggtgagaatggggagctacgtgttggagttaggcgggcattgaggcaccaa
accactatcccatcttcagtcatatcaagccacagtatgcatcttggtgttcttgcaaca
gcatggcatgcagtgaacactgggagtatgttcactatctactacaagccaaggactagt
ccagccgaattcatggtctcgcgtgataagtactatgaatcactgaaacgaaattattca
atagggatgagattcaagatgagatttgaaggcgaagaggcagcagagcagaaattcact
ggaacaatagttgggataggtgcttctgatccatctggctgggctgactcgaaatggcgt
tcccttaaggtgagatgggatgaagcttcttccgttcctcgtccggaaagagtttctgct
tggcaaatagaacctgctgttagcccatctcctgtgaaccctcttccacccagattcaag
aggtctcgttcaaatgttaatgcttcgccacctatcatgccaaatgtaaccagagaagtt
gcttctaaagtaatgccggactctcaacaaaatagtctcccaagggccatgcacagtcaa
ggaaggacacaattgactagtcaataccgtgatagcagtgatctgaagtctgctcaggat
ctcaccatgtggtctaaagggattgagcaggagagaaacaatattagtgcccagacaaag
ctaagtctggagggttggacacaaacaagaagacctgaaggttacaatcagccgttatca
gcatttcaaccactgaaagatgcgcagaatccactttgttcttttcctagtcaattatct
ggaaaccgctcaaggaactgggacacaattgattctcattatccagtccaacaagccaac
cacaacatgtcacctggaaccttgtctttaatgcctcataacaatggttttaggatggat
caacaaatgaatctatcaatgccaggagctccacatcctcaaagggctgaaattgcaaaa
tttagtggtaaatcggctttcacccctcttcagggccatggcattgatcagtgctcctca
gactggtttgggcatatcaagccccagcctttggttattgagaatgatggacagaaaacc
aaaggcacttcattcaagctatttgggtttcctcttggcagcctggaaaaatctgaacct
ctggtatctccaccaagtgtcgcatatgacgggaagcaaacatctccatcagaaaggaat
cagcttggcataattgaggtgcataagcaaggcagtgccctcggcaggtcgattgatctg
acaacgttcacttgctacgatgaactgattgctgaactggaccagatgtttgactttgat
ggtgagctgagcagtcctcaaaagaactggttggtcgtctacactgacaatgaaggtgac
atgatgcttgttggtgatgatccctggaatgagttctgcaacatggtccacaagatctcc
atctacacaagggaggaggtggaaaagatgaacccgggcgccctgaactcaaggcctgaa
gatagtctgtccgactcgctggggagaggattgggttccaaggaggctccaggtgggcca
tccacttcgtacctcaactccgagaaccactaa
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