Panicum virgatum (switchgrass): 120666185
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Entry
120666185 CDS
T07260
Name
(RefSeq) metal transporter Nramp1-like
KO
K21398
natural resistance-associated macrophage protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120666185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120666185
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
120666185
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GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
120666185
NCBI-ProteinID:
XP_039801909
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Position
2K:complement(11205344..11214893)
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AA seq
520 aa
AA seq
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MDAAQAPAGVVVDVEALAGRGGSHAPAAPPKEPAWKRFLCHVGPGFMVSLAYLDPGNLET
DLQAGSSHRYELLWVILIGLVFALIIQSLSANLGVVTGWHLAELCKAEYPTWVRICLWLL
AELAVIAADIPEVIGTAFAFNLLFHIPVWVGVLITGSSTLLLLGLQKYGVRKLELLVALL
VFTMAACFFIEMSIVKPPSKEVIHGLFVPSLSGSGATGDTIALLGALVMPHNLFLHSALV
LSRNTPSSVRGIKDACRFFLFESGVALFVALLINICIVSVSGTICNSSKLSPDDSAKCSD
ITLDSSSFLLRNVLGKNSAVVYGVALLACGISSTITGTYAGQYIMQGFLDIKTKQWLRNL
MTRSIAIVPSLIVAIIGGSSGAGRLIIIASMILSVELPFALIPLLKFSSSSNKMGENKNS
IYIIWFSWILGFIIIGINIYFLSSKLVGWIFHNSMPIYASVLIAIVVFPLMLLYISAVIY
LTFRKDTIKFALRGELQAVETDKSKVANHSSNEENKEQLV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcgcaggcgcccgcgggagtggtggtcgacgtcgaggcgctcgccggacgg
ggagggagccacgctcccgctgcgccgcccaaggagccagcatggaaaaggtttttgtgc
cacgttggaccaggatttatggtttccctggcctaccttgatcccgggaacttggagacg
gatttgcaggctggatccagtcacagatatgagctcctctgggtgatcctgattggcctc
gtcttcgcactaatcattcagtcactatctgctaatctcggagtagtcacagggtggcat
cttgccgagctatgcaaggcggaatatccaacatgggttagaatctgcctatggctgctg
gcagagttagctgtgattgctgcagatatcccagaagttatagggacagcttttgctttc
aacctcttgttccacatccctgtttgggtaggggttctcatcaccggctcaagcacgctt
ctcctccttggactgcaaaaatatggggttaggaagctggagcttttggttgcgctattg
gtgttcaccatggcagcatgcttcttcatagagatgagcattgtaaagcctccttcaaag
gaggttatccacgggctattcgtccctagtttgagtggttctggtgctactggggacact
atagcccttcttggggctcttgtgatgccgcacaatctattcttgcactctgccctggta
ctgtcaaggaacacaccctcatctgtaagaggaatcaaggatgcttgcagattcttcctt
tttgaaagtggcgtagcgctgtttgtggcacttctcatcaacatctgtattgtctctgtc
tctggaaccatctgtaactcaagcaaactctcacctgatgactcagcaaaatgcagtgac
atcaccttggactcctcgtccttcctcctcaggaatgtgctaggtaagaacagtgccgtt
gtgtatggagtggcactcttggcttgtggaataagctcaaccatcactggcacttacgct
gggcaatacatcatgcagggtttcttggacatcaagacgaaacagtggttgaggaacttg
atgactcgcagtattgcgattgtaccaagcttaattgttgccatcatcggtgggtccagc
ggcgctggccgtctcatcatcatcgcatcgatgatattgtcagttgagctaccgtttgct
ctcatcccacttctaaagttcagcagtagtagcaacaagatgggagaaaataagaactcc
atctatattatttggttctcgtggatcctcgggtttatcattattgggataaacatctac
ttcctcagctctaaactagttggctggatcttccacaactcgatgccgatttacgctagt
gtgctcatcgccattgtcgtgttcccccttatgctgctctacatctctgccgtgatctac
ctgacgttcaggaaggacaccatcaagtttgcacttcgtggtgagctgcaggctgttgaa
actgacaaatcaaaggtcgccaatcatagcagcaatgaggaaaacaaggagcagcttgtt
tag
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