Panicum virgatum (switchgrass): 120666215
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Entry
120666215 CDS
T07260
Name
(RefSeq) metal transporter Nramp1-like
KO
K21398
natural resistance-associated macrophage protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120666215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120666215
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
120666215
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
120666215
NCBI-ProteinID:
XP_039801937
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Position
2K:complement(11245323..11254229)
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AA seq
531 aa
AA seq
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MFVVAPSLTAVGPQAPLLSNSNFGPPEPKSFTELIHWCFLTQEPAWKRFLCHVGPGFMVS
LAYLDPGNLETDLQAGSSHRYELLWVILIGLIFALIIQSLSANLGVVTGWHLAELCKAEY
PTWVRICLWLLAELAVIAADIPEVIGTAFAFNLLFHIPVWVGVLITGSSTLLLLGLQKYG
VRKLELLVALLVFTMAACFFIEMSIVKPPSKEVIHGLFVPSLSGSGATGDTIALLGALVM
PHNLFLHSALVLSRNTPSSVRGIKDACRFFLFESGVALFVALLINICIVSVSGTICNSSK
LSPDDSAKCSDITLDSSSFLLRNVLGKNSAVVYGVALLACGISSTITGTYAGQYIMQGFL
DIKTKQWLRNLMTRSIAIVPSLIVAIIGGSSGAGRLIIIASMILSVELPFALIPLLKFSS
SSNKMGENKNSIYIIWFSWILGFIIIGINIYFLSSKLVGWIFHNSMPIYASVLIAIVVFP
LMLLYISAVIYLTFRKDTIKFALRGELQAVETDKSKVANHSSNEENKEQLV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttgtagctccaagcctcacggcagttggtcctcaggctcctctgttgtccaac
tcaaattttggtccacccgagccaaagtcttttacagaactgattcattggtgcttctta
acgcaggagccagcatggaaaaggtttttgtgccacgttggaccaggatttatggtttcc
ctggcctaccttgatcccgggaacttggagacggatttgcaggctggatccagtcacaga
tatgagctcctctgggtgatcctgattggcctcatcttcgcactaatcattcagtcacta
tctgctaatctcggagtagtcacagggtggcatcttgccgagctatgcaaggcggaatat
ccaacatgggttagaatctgcctatggctgctggcagagttagctgtgattgctgcagat
atcccagaagttatagggacagcttttgctttcaacctcttgttccacatccctgtttgg
gtaggggttctcatcaccggctcaagcacgcttctcctccttggactgcaaaaatatggg
gttaggaagctggagcttttggttgcgctattggtgttcaccatggcagcatgcttcttc
atagagatgagcattgtaaagcctccttcaaaggaggttatccacgggctattcgtccct
agtttgagtggttctggtgctactggggacactatagcccttcttggggctcttgtgatg
ccgcacaatctattcttgcactctgccctggtactgtcaaggaacacaccctcatcagta
agaggaatcaaggatgcttgcagattcttcctttttgaaagtggcgtagcgctgtttgtg
gcacttctcatcaacatctgtattgtctctgtctctggaaccatctgtaactcaagcaaa
ctctcacctgatgactcagcaaaatgcagtgacatcaccttggactcctcgtccttcctc
ctcaggaatgtgctaggtaagaacagtgccgttgtgtatggagtggcactcttggcttgt
ggaataagctcaaccatcactggcacttacgctgggcaatacatcatgcagggtttcttg
gacatcaagacgaaacagtggttgaggaacttgatgactcgcagtattgcgattgtacca
agcttaatcgttgccatcatcggtgggtccagcggcgctggccgtctcatcatcatcgca
tcgatgatattgtcagttgagctaccgtttgctctcatcccacttctaaagttcagcagt
agtagcaacaagatgggagaaaataagaactccatctatattatttggttctcgtggatc
ctcgggtttatcattattgggataaacatctacttcctcagctctaaactagttggctgg
atcttccacaactcgatgccgatttacgctagtgtgctcatcgccatcgtcgtgttcccc
cttatgctgctctacatctctgctgtgatctacctgacgttcaggaaggacaccatcaag
tttgcacttcgtggtgagctgcaggctgttgaaactgacaaatcaaaggtcgccaatcat
agcagcaatgaggaaaacaaggagcagcttgtttag
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