KEGG   Panicum virgatum (switchgrass): 120666269
Entry
120666269         CDS       T07260                                 
Name
(RefSeq) glycine-rich RNA-binding protein 2, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120666269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120666269
   03041 Spliceosome [BR:pvir03041]
    120666269
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120666269
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120666269
Spliceosome [BR:pvir03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120666269
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 120666269
NCBI-ProteinID: XP_039802017
LinkDB
Position
3N:56550010..56553167
AA seq 263 aa
MALTNKLGGLLKKATSSNPSIYQAIRCMSSSKLFVGGLSYGTDDQSLRDSFANYGQVIEA
RVIMDRESGRSRGFGFVTYTSSEEASAAITAMDGQDLHGRNIRVNHATEKTGGFRAGGGG
GFGGGGYGGGGFGGGGYGGGGFGGGGGGYDGSGGYGAGYGSGGGGGYGGGNYGNRGGGGY
GGGGVAGGAGGNFAAGGGDSFGSNFGGESGFGNPAGGFGAPSGTCGGDELPASGSFSSNK
NDEIMQDMFKDDDEPDNYADKRA
NT seq 792 nt   +upstreamnt  +downstreamnt
atggcactgactaataagcttggtggccttctcaagaaagccactagctcaaatccttct
atctatcaagcaatcagatgcatgtcatcatctaagctctttgttggagggctttcttat
ggcactgatgatcagagtctcagagattcctttgcaaattatggccaggttattgaagct
agggttatcatggaccgtgagtctggaagatccagaggttttggctttgtaacttacaca
tcatctgaggaggcttcagctgccatcactgccatggatggacaggatctccatggaagg
aacataagggttaaccatgctactgagaagacaggtggtttccgggctggtggcggcggc
ggttttggtggtggtggctatggcggcggcggttttggtggtggaggctatggcggcggt
ggttttggtggtggtggcggtggttacgatggcagcggagggtacggtgcgggctatggt
agcggcggcggcgggggctatggtggtggcaactatggcaacaggggtggcggcggctat
gggggtggtggagttgcaggtggagctggcggcaattttgctgctggaggtggcgacagc
tttggcagcaacttcggtggtgaaagtgggtttggaaaccctgctggtggattcggtgct
cccagtggcacctgtggtggtgatgagttacctgctagtggcagcttcagcagcaacaag
aatgatgaaatcatgcaagatatgttcaaggatgacgacgagcctgacaactatgccgac
aaaagggcctag

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