Panicum virgatum (switchgrass): 120666313
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Entry
120666313 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 30-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120666313
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120666313
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120666313
NCBI-ProteinID:
XP_039802064
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Position
3N:57780696..57785088
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AA seq
482 aa
AA seq
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MTTTDISAQLLPSKMKKLVSKSWEESRLLWQVAFPAILTEVFQFSIGFVTTGFVGHLGEV
ELAAVTVVENIIELFAFGVLFGIGSALDTLCGQAVGAGQLDMLGIYTQQSWLVCGATAVA
LTPAYAFTSPILRSLLRQPADVSAAAGPYARWAIPRLFAHAANYPLLKFFQTQSRVWAVA
AISGASLAAHVALTYAAVRRLGFGLRGAAVAGNISHWLIVVAQLVYMVRGRFPDSWKGFS
IRAFRNLGAFVKLSLASAVMICLEVWYYMALLILVGLLKNAKLQLDIMSVCINYEFWTMM
MALGFSTAISVRVSNELGANRPKVAQFSVVVAAATSAFVGATFMAVFLVWRTSLPKFFSD
SEEVIHGASRLGYLLAVSVLLSNIWPLLSGVAVGSGLQVLVAFINVGTYYLVGIPLGVLF
GFKLKLGTMGIWMGMLTGTSLQIAILLFIIVRMKWETQSKLAVERTAEWEAKNNDRELMA
SI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactactactgatatttctgcacagttacttccaagtaaaatgaagaagcttgtcagc
aagagctgggaggagtcgaggctgctatggcaggtcgccttcccagcgatcctcaccgag
gtgttccagttctccatcgggttcgtcaccaccggtttcgtcgggcacctcggcgaagtc
gagctcgccgccgtcaccgtcgtggagaacatcatagagctcttcgccttcggagtcctg
ttcggcatcgggagcgcgctggacacgctgtgcggccaggccgtcggcgccgggcagctc
gacatgctgggcatctacacccagcagtcgtggctcgtctgcggcgccacggcggtggcg
ctgacgccggcgtacgccttcacctcgccgatcctgaggtccctcctccgtcagcccgcc
gacgtgtcggccgccgccgggccgtacgcccggtgggcgatcccgcggctgttcgcccac
gcggcgaactacccgctcctcaagttcttccagacccagagcagggtctgggccgtggcc
gccatctccggagcgtcgctcgccgctcacgtcgcgctcacctacgccgccgtgaggcgg
ctggggttcggcctccgcggcgccgccgttgccgggaacatctcccactggctcatcgtc
gtcgcgcagctcgtttacatggtgcgaggccggtttccggactcgtggaagggcttctcg
attcgtgcgttcaggaaccttggcgcattcgtcaagctgtcgctggcgtctgctgtcatg
atctgcttggaggtttggtattacatggcactgctcattcttgtgggtctcctgaagaat
gctaaactccagcttgacatcatgtcagtttgcatcaactacgagttctggaccatgatg
atggcactgggtttcagcacagcaatcagcgtgagggtgtcgaatgagctgggtgcaaac
aggcccaaggtggcacaattctcggttgttgttgcagcagcaacatcggccttcgtcgga
gcaactttcatggccgtcttcctcgtttggaggactagcttgcccaagttcttcagcgac
agcgaagaggtgattcacggagcctcgagattaggatatcttctcgctgtgagcgtcctt
ttaagcaacatctggcctctactatcaggtgtggcggtagggtcagggttgcaagtgctt
gtggcattcataaacgttggcacctactacttggtgggaattccattgggggtcctgttt
ggcttcaagctaaaactcggtacaatggggatatggatgggcatgttgacagggacttca
ctccaaatagccatacttcttttcattatcgtcagaatgaagtgggagacacagtcgaag
cttgctgttgaaaggactgcagagtgggaagcaaagaacaatgaccgggaattgatggca
tctatatag
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