Panicum virgatum (switchgrass): 120666371
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Entry
120666371 CDS
T07260
Name
(RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120666371
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
120666371
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
120666371
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
120666371
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Motif
Pfam:
DHquinase_I
Shikimate_dh_N
Shikimate_DH
SDH_C
Sacchrp_dh_NADP
FAD_binding_2
F420_oxidored
AlaDh_PNT_C
adh_short
Pyr_redox_2
NAD_binding_2
AAA_30
AdoHcyase_NAD
2-Hacid_dh_C
GIDA
Motif
Other DBs
NCBI-GeneID:
120666371
NCBI-ProteinID:
XP_039802135
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Position
3N:complement(58898811..58904900)
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AA seq
541 aa
AA seq
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MATAMSVSAVSPAAAAVARPRTLVCVPATARAPREMAAELAAAAALGADVAELRLDCLAG
FAPRRDLPVILAEPRPLPALVTYRPKWEGGEYEGDEEPRFEALMLAMELGAEYVDIELKA
AEKFMRLLAGKKPENCKLIVSSHNYENTPSAEELADLVAQIQATGADIVKIATTATEIVD
VARMFQILVHCQEKQVPIIGLVMNERGFISRVLCPKYGAYLTFGSLEKGKESSPAQPTAA
DLINLYNIRQIGPDTKVFGIIGNPVGHSKSPILHNEAFRSVGFNAVYVPFLVDDLAKFLN
TYSSPDFAGFSCTIPHKEAAVRCCDEVDPIARDIGAVNTMVRRPDGKLVGYNTDYVGAIS
AIEDGIRASQQTDPTTSPLAGRLFIVIGAGGAGKALAYGAKEKGARVVIANRTFARAQEL
ANLIGGPALTLADLENYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTP
KETRLLREAAECGATVVSGLEMFIRQAMGQFEHFTGMPVDNENFRAITSSLDSPNTMMPR
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcgatgtcggtgtcggcggtgtccccggccgccgccgccgtcgcgcgcccg
cggacgctcgtctgcgtgccggcgacggcgcgggcgccccgtgagatggcggcggagctg
gccgccgccgccgcgctcggcgccgacgtcgcggagctccgcctcgactgcctcgccggg
ttcgcgccgcgcagggacctgcctgtcatcctcgccgaaccgcgcccgctccccgcgctc
gtcacctacaggcccaagtgggaaggtggcgaatatgaaggcgacgaggagccgcggttc
gaggcgctaatgctggcaatggagctgggagctgaatacgttgatattgagctcaaggct
gctgagaaatttatgagacttttggctgggaagaaacctgaaaactgtaagctcattgtt
tcatcccataactatgagaatactccatcagcagaggagcttgcagatttggtggctcag
atacaagcaacaggggctgatattgtgaaaatcgcaaccactgctactgaaattgttgat
gtggcaagaatgtttcaaatacttgtacattgccaagaaaagcaggtgccaatcattggg
ctggtaatgaatgagagaggttttatttcccgagttctttgcccaaaatatggtgcatac
cttacttttgggtctcttgaaaaaggaaaagaatcctcacctgcacaaccaacagcagca
gacttgattaatttgtacaatatcaggcaaataggcccagacactaaggtctttggtatt
attgggaatccagttggtcacagtaagagcccaattttgcataacgaagctttcagatct
gtgggtttcaatgctgtgtatgtgccctttttggtggatgacctggctaaatttcttaat
acatactcttcaccagactttgctggcttcagttgcacaattccccataaagaagctgca
gttaggtgctgtgatgaagttgatcctattgccagggacattggagctgttaacacaatg
gtgagaagacctgatggaaaacttgttggctataatactgactatgttggtgctatttct
gctattgaggatggaataagagcatctcaacaaacagatccaaccacttccccactggct
ggaagacttttcattgttattggggctggtggtgcgggcaaagccctagcatatggtgca
aaagagaagggagcaagagttgtaattgcaaaccgtacttttgcacgtgctcaagaactt
gccaacttaattggcggacctgctttgactctggcggatctggaaaattaccatccggag
gaagggatgattcttgcaaacacaacagccattggaatgcatccaaatgtcaatgaaact
cctttatctaagcaagcactgaaatcctatgccgttgtctttgatgctgtctacacgcca
aaagagaccagacttctccgtgaagctgcagaatgtggagccacagttgttagcggtctg
gaaatgtttataagacaagcaatgggtcaatttgagcatttcacgggcatgccagttgac
aacgaaaacttcagagcaattacaagttcgctggacagccctaacaccatgatgcctcgt
ctgtga
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