KEGG   Panicum virgatum (switchgrass): 120666419
Entry
120666419         CDS       T07260                                 
Name
(RefSeq) F-box/LRR-repeat protein 3-like
  KO
K10268  F-box and leucine-rich repeat protein 2/20
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120666419
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120666419
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 LRR_NXF1-5 LRR_14 LRR_At1g61320_AtMIF1 F-box_5 LAMTOR5
Other DBs
NCBI-GeneID: 120666419
NCBI-ProteinID: XP_039802198
LinkDB
Position
3N:60023710..60027722
AA seq 663 aa
MSREGQKLDCAAGAGGVGIGVLSLDLLGQVLDRLREPRDRKACRVVSRAFERAEAAHRRA
LRVLRRERLPRLLRAFPALERLDLSACASLDDASLAAAVAGAGGGLAGLRRVCLARASGV
GWRGLEALVAACPRLEAVDLSHCVGAGDREVAAVAAAAGLRDLRLDKCLAVTDMGLAKVA
VGCPRLEKLSVKWCREISDIGIDLLAKKCPELRSLNISYLKVGNESLRSISTLEKLEELA
MVGCSCIDDEGLELLSKGSDSLQSVDVSRCDHVTYQGLASLIDGRKFLQKLHAADCLHEI
GQCFLSKLSTLKETLTVLKLDGLGVSDSLLQAFGEGCNNLVEIGLSKCSGVTDEGISSLL
ARCSDLKTINLTCCNLITNNALNSIADNCKMLECLLLESCSLINEKGIKQIATCCPNLKE
IDLTDCGVNDAALEYLAKCSELRILKLGLCSSISDKGIAFISSNCGKLVELDLYRCNSFT
DDGLAALANGCKKIKLLNLCYCNKITDSGLGHLGSLEELTNLELRCLVRITCIGISSIAI
GCKSLIELDLKRCYSVDDASLGALARNALNLRQLTISYCQVTGLGLCHLLSSLRCLQDIK
MVHLSWVSIEGFEMALRAACGRLKKLKMLTGLKTVLSPELLQMLQACGCRIRWVNKPLVY
KDC
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgagccgggaggggcagaagctcgactgcgccgccggcgccggcggcgtcgggatcggg
gtgctgtcgctggacctgctgggccaggtgctcgaccgcctgcgcgagccgcgggaccgc
aaggcgtgccgcgtcgtcagccgcgccttcgagcgcgccgaggccgcgcaccgccgcgcg
ctgcgggtgctccggcgggagcgcctcccgcgcctgctccgcgcgttcccggcgctcgag
cgcctcgacctctccgcctgcgcctcgctcgacgacgcctcgctcgccgcggccgtcgcc
ggcgccggagggggcctcgcggggctccgccgcgtgtgcctggcccgggccagcggggtc
gggtggcgcgggctcgaggcgctcgtcgccgcatgtcccaggctggaggccgtcgacctg
tcgcactgcgtcggcgccggggaccgcgaggtcgcggcggtggcggccgcggccgggctc
agggacctcaggctggacaagtgcctcgctgtcacggacatggggctcgccaaggtggct
gtcgggtgccccaggctggagaagctcagtgtcaagtggtgccgtgagatttctgacatc
ggaattgatctgctcgccaagaaatgccccgagctccgcagcctcaacatctcctacctc
aaggtgggtaatgaatcccttagatcaatatctacacttgagaagctcgaggagttggca
atggttggttgctcatgtatagatgatgaaggcctggaattactgagcaaggggagcgac
tcactgcagagtgttgatgtgtcaagatgtgatcatgtgacttaccagggattagcttca
ctcatagatggtcgcaaatttctccagaagttacatgctgcagattgtttgcatgagata
ggacagtgttttctgtccaagttgtcaacactgaaggaaaccttgactgtgttgaaactc
gatggtcttggagtctcagactctctccttcaagcctttggtgaaggttgtaacaacctg
gttgagattggacttagcaaatgcagtggcgttacagatgaaggaatctcatctcttcta
gctcgatgtagtgacctaaagacaattaatctcacatgctgcaatctcatcaccaataat
gcgcttaattcaatagcggacaactgtaagatgcttgaatgcttgctgttagaatcctgc
tctttgataaatgagaagggaataaagcaaattgcaacttgttgccccaatcttaaggag
atagacctcactgactgtggagtgaatgatgcagcgctggagtacttggctaaatgttct
gaactgcgaatattgaaattaggcctatgctcaagtatttccgacaaaggcattgctttt
attagttcaaactgtggcaagctcgtggagcttgacctctaccggtgcaactcctttact
gatgatgggctggcagctttagcaaatggctgcaagaagattaagttgttaaacttgtgc
tactgcaacaagattactgatagtggtttgggccacttaggctctctggaggagcttaca
aatcttgagctgaggtgcttggtccgcatcacgtgcatagggatctcgtcgattgcaatc
ggatgcaagagcctgatagaactggatttgaaacgttgctattcggttgacgatgctagt
ctgggggcccttgctcgtaatgctttgaaccttagacagcttaccatatcatactgccaa
gtcaccggcttgggcctgtgccacctgctgagctccctgcggtgcctccaggacattaag
atggtgcacctctcgtgggtctccatagaagggtttgagatggcgctgcgagcggcctgt
gggaggctgaagaagctgaagatgctcaccgggttgaagaccgtgctgtccccggagctc
ctccagatgctgcaggcgtgcggctgccgaataagatgggtcaacaagcctcttgtctac
aaggactgctga

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