Panicum virgatum (switchgrass): 120666498
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Entry
120666498 CDS
T07260
Name
(RefSeq) transcription factor JAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120666498
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120666498
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120666498
NCBI-ProteinID:
XP_039802285
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All DBs
Position
3N:complement(61405875..61408050)
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AA seq
300 aa
AA seq
DB search
MAEPQRSRSRSRASSPGAPVELDDDHGQPGGAAQDQEEQLELRRGPWTVDEDLTLVNYIA
DHGEGRWNSLARAAGLKRTGKSCRLRWLNYLRPDVKRGNFTADEQLLILDLHTRWGNRWS
KIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDANSKRFKDAMRYLWMPHLVDADDHRRRL
LQAAHHHHAADVAAAHGLSGAGMVTSASSDSFATTAESYDDVGGLCYANLLHAGEMAAVG
GGGGCWPHEANHQGLWPAAADQAGSGGQFQDPELSGWVQGFSEGMITENFWALEDIWKIQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccccagaggagcaggagcaggagcagggctagctcgccgggggctcctgtt
gagctcgacgacgaccacggccagcccggaggggcggcgcaggatcaggaggagcagctg
gagctccggcgcggcccgtggaccgtcgacgaggacctcaccctcgtcaactacatcgcc
gaccacggcgagggccgctggaactccctcgcccgcgccgccgggctgaagcggacgggc
aagagctgccggctgcggtggctgaactacctccggcccgacgtgaagcgcggtaacttc
accgccgacgagcagctgctcatcctcgacctccacacccgctggggcaaccggtggtcc
aagatcgcgcagcacctgccggggaggacggacaacgagatcaagaactactggaggacc
cgggtgcagaagcacgccaagcagctcaactgcgacgccaacagcaagcgcttcaaggac
gccatgcgctacctctggatgccgcacctcgtcgacgccgacgaccaccgccgccgcctc
ctccaggcggcgcaccaccaccacgccgccgacgtcgccgccgcccacggcctgtccggc
gccgggatggtcacctcggcgtcctcggactccttcgcgaccacggccgagtcgtacgac
gacgtgggggggctctgctacgcgaacctgctgcacgccggggagatggcggccgtgggc
ggcggaggcggctgctggccgcacgaggcgaaccaccaagggctgtggccggcggcggcc
gatcaggctggcagcggcggccagtttcaggacccggagctcagcgggtgggtgcaaggc
ttctccgagggcatgatcaccgagaatttttgggccttggaggacatctggaagatccaa
tga
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