Panicum virgatum (switchgrass): 120666519
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Entry
120666519 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein 4-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
pvir04141
Protein processing in endoplasmic reticulum
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120666519
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120666519
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120666519
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120666519
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120666519
03009 Ribosome biogenesis [BR:
pvir03009
]
120666519
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120666519
04131 Membrane trafficking [BR:
pvir04131
]
120666519
03051 Proteasome [BR:
pvir03051
]
120666519
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120666519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120666519
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120666519
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120666519
Complex C
Prp19-CDC5 complex
120666519
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120666519
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120666519
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120666519
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120666519
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120666519
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120666519
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120666519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
120666519
NCBI-ProteinID:
XP_039802314
LinkDB
All DBs
Position
3N:61919568..61923673
Genome browser
AA seq
649 aa
AA seq
DB search
MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFTDASVQSDIKLWPFKVISGPGEKPMIVVQHKGEEKQFAA
EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVLEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFF
NGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKK
KVEAKNSLENYSYNMRNTIRDEKIASKLAADDKKKIEDAIDAAISWLDANQLAEADEFED
KMKELESLCNPIIAKMYQGAGADMGGAAGMDEDAPAGSGGPGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagggcgacgggccggcgatcggcatcgacctcggcaccacctactcgtgc
gtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgcacc
accccctcgtacgtcgccttcaccgactccgagcgcctcatcggagatgcggccaagaac
caagtcgccatgaaccccatcaacaccgtctttgatgccaagcgtctcatcggcaggagg
ttcactgatgcttctgtccagagtgatatcaagctctggccattcaaggtcatttctgga
cctggtgagaagcccatgattgttgtccagcacaagggtgaggagaagcagtttgccgct
gaggagatctcatccatggttctgatcaagatgcgcgagattgctgaagcttaccttggc
agcactatcaagaacgctgtggtcacagttcccgcctacttcaatgactcccagaggcag
gccaccaaggatgctggggtgattgctggcctcaacgtgctgcgtatcatcaatgagccg
actgctgctgctattgcctatggtcttgacaagaaggctaccagtgtgggcgagaagaat
gtcctcatctttgaccttggtggtggtaccttcgatgtttccctcctcaccattgaggaa
ggtatctttgaggtcaaggccactgctggtgatactcatcttggcggtgaggacttcgac
aacaggatggtcaaccactttgtcctggagttcaagaggaagaacaagaaggacatcact
ggcaaccctagggctctcaggaggttgaggacagcctgtgagagggcgaagaggactctg
tcttccactgcccagaccaccattgagattgattcgctgtacgagggcatcgacttctac
tccaccatcacccgtgctagatttgaggagctcaacatggacctgttcaggaagtgtatg
gagcctgttgagaagtgcctgcgggatgccaagatggacaagagcagtgtgcacgatgtt
gtccttgttggtggttctaccaggattcccagagtgcagcagctgctccaggacttcttc
aacggcaaggaactgtgcaagaacatcaaccctgatgaggccgttgcgtatggtgctgct
gtccaggccgccatcctgagcggtgagggcaacgagaaggtgcaggacctgcttctgttg
gacgtcacccctctgtcccttggtctggagactgctggaggagtgatgaccgtgctgatc
ccgaggaacaccaccatccccaccaagaaggagcaggtgttctccacctactcggacaac
cagcctggtgtcctgatccaggtgtacgagggtgagaggaccaggacccgcgacaacaac
ctcctgggcaagttcgagctctccggcatcccccctgctccccgtggtgtcccccagatc
acggtctgcttcgacatcgacgccaacggcatcctgaacgtctccgccgaggacaagacg
accgggcagaagaacaagatcaccatcaccaacgacaagggccgcctgtccaaggaggag
atcgagaagatggtgcaggacgcggagaagtacaagtcggaggacgaggagcacaagaag
aaggtggaggcaaagaactcgctggagaactactcctacaacatgcgcaacacgatccgc
gacgagaagatcgcctcgaagctggccgccgacgacaagaagaagatcgaggacgcgatc
gacgcggccatcagctggctggacgccaaccagctggccgaggcggacgagttcgaggac
aagatgaaggagctggagagcctgtgcaaccccatcatcgccaagatgtaccagggcgcg
ggcgcggacatgggcggcgccgccggcatggacgaggacgcgccggccggcagcggcggc
ccgggccccaagatcgaggaggtggactaa
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