Panicum virgatum (switchgrass): 120666570
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Entry
120666570 CDS
T07260
Name
(RefSeq) formin-like protein 12 isoform X1
KO
K28090
formin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120666570
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
120666570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
DUF6548
Motif
Other DBs
NCBI-GeneID:
120666570
NCBI-ProteinID:
XP_039802373
LinkDB
All DBs
Position
3N:complement(63092649..63112693)
Genome browser
AA seq
1968 aa
AA seq
DB search
MALFRRLFYRKPPDRLLEIADRVYVFDCCFSTETMDQYKYKNYLDSIILQLREQFADSSL
MVLNFRDEGKGLVSGIFSMYGITVKDYPCHYQGCPLLPLEIILHFLRLSERWLMVEGQQN
ILLMHCEKGAWPVLAFMLAGLLLYRKQYNGEQRTLDMVYKQAPKELLQMLTALNPQPSHF
RYLGYICRMDDELGWPTQPIPFTLDCVILRKVPNFDGVGGCRPIVRVHGQDILNRSVSPA
SKAKKHVRRYRQADNVPVKLNVGSYVQGDVVLECLHVDDGPEDEDEKLMFRVMFNTFFIQ
SHILLLNFEDIDILWDADHKFTKNFKAEVLFSEFDAESDVSTEVAHDDDDIDVASADEFF
EAEEIFSNADSQEGQKDADTLSTTSTDFGPTPRAEPRKNSPFTNFELDIGINGSGDNKID
ELGLLLETTNDEKTCTSNEANTMHSNKTGVVKSSLPATIDEDRDDAISCSSSNKEHDCML
ENCSSKHDKSMGSNQDSSQIDNVLVKEVIISETNSPKDIQMIKEVIISEVTAPKLVLEGN
KMDTELGETVHNLESTTLEEAEDKQQLDTFPKDEGDSGGGEYAAYDNGLVIEHEESSNEQ
KLHIRDANVQVIGPTDENNRVALPLSGKSHLQSSSTSSESSSVKKQIKRLRACGSNGTVE
QTEGIDASFSSSQSQSSNISSVNIPPEGSTIAVTHVPTSVNAKKKHFVPLSTSSLFAQSS
PRRSLLRAASTDLSFLSPLQRESKQNSVASTSGRDDSASSSMPPPSSLYTPSGSSSKISL
VHPLLRPIRTVSSLPSLTFEAYIEMSMSSSISPKHQEHVKPHLPTVRPPRPLNFPSSNKY
DPHSPRPPPLPPPLPPPRDPCTQSDSSTLISEHGQTRAHRSCSSSHDCIQTVLDLSDSSL
TSPSKTSIDTTECLLGASNLVDDEVASRPDTLTGMDVPTTSEDANSLLHLEPCNVEISQS
ETINGVLPAIVDDKEHGGIPIQPSPQKSSQPIIFSPPPPPPPPSCHATIVTSPCLSLIPL
SPRKHYENTPSPPPPPPFSREAFVAPPPPPLPNRPSPRRKHITPPPSPPSQSPTRHIIPP
PPPPPLRYIASPSPCSYQPHFQKDVAIPPSPLLEDHVVVSSPPLTRVDKIPLPPPPPPPP
SPPPRGSEILSPPSIESTKSPRKAQVTKQIPPPPPLPKEQKGSPLPTLCGGIMNFPPHLP
PGGHREAPLTAPSRELRGIPPPPPLTGELGGIQLPIEFQCGDLSLYQPIERLEGPSRSPP
PPPPPPPPPYSNEYIGDPPPLPPSRACGGAPPPPPHPKGYAGVPLPPPPPGGYVGAPSPP
LGGNVGSPPPPPPPPRRYIEAPPPPPPPGAYVGAPPPPPPPGGYVGAPPPPPPPGGYAGA
PPPPPTGGYAGAPPPPPRPGGYAGAPPPPPPPGGHVGAPPPPPPPGGYIGAPPPPPRPGG
IGGVPPPPPPIGGLGGTPLPPPPAGFRGGAPPPPPPPPGGHGGPPPPPPRGHGGVGGPPP
PPGAPAPPMPLGVPGGPPPPPGGRGMPTPPGGRGHGLARALGSTLQSAARRSSLKPLHWV
KVTRAMQGSLWAELQKQVDANSHAEFDVNELESLFTIAPKTKGGSKSEGRGKSLGSKPDK
VQLIDLRRANNTEIMLTKIKMPLSDMMSAALALDDSVLDADQIENLIKFCPTKEEMELLK
NYSGDKEALGKCEHFFLELMKVPRVESKLRIFAFKIQFQSQIRDVRKNLQTVSSACEELR
SSEKLKVIMKNILLIGNTLNQGTPRGQAVGFRLDSLLKLIETRATNGRMTLMHFLCKSLA
EKSPEVMDFHEDLVSLEASSKLQLKALAEEQQAVVKGLEKVELELTASESDGPVSDVFRK
TLKEFIDCSGADVRSLSAFYSEVGKSADALALYFGEDPAKFPFEQVATTLLTFVGLFRKA
HDENLKQIEAEKKKAQKEAEKEANQDKTPVKSKNGNEDKSPRSPSAFK
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggccctcttccggaggctcttctaccggaagcctccggatcggctcctcgagatcgcc
gaccgcgtctatgtattcgattgttgcttctcgacagaaaccatggatcaatacaaatac
aagaattacctggacagcattattttgcagctccgtgaacagtttgcagattcttcattg
atggtactcaacttcagagatgaaggaaagggtctggtttcaggcattttctccatgtat
ggtattacagtcaaagactacccttgccactaccaaggatgcccattacttcctttggaa
ataattctccactttctaagactgagcgagaggtggcttatggttgaaggccagcaaaac
attctgctaatgcactgtgagaaaggtgcatggccagtgttggcttttatgcttgcaggt
cttcttctgtataggaaacaatataacggggagcaacgaactctagatatggtgtacaag
caagcaccaaaggagcttcttcagatgttaaccgcattgaatccacaaccatctcatttt
cggtatcttgggtacatatgcagaatggatgatgagttgggttggcccacgcagcctatt
cctttcaccctggattgtgtaatccttagaaaagttccaaattttgatggagtaggtggt
tgtcggcctatagttcgagtacatgggcaggatattctaaacagaagcgtttcaccagca
tcaaaggccaagaagcatgttaggcgttacagacaggcagacaatgtgccagtgaagtta
aatgttgggtcctacgtccaaggtgatgtcgtccttgaatgcctgcacgtggatgatggc
ccagaagatgaagatgaaaagttaatgttcagagtgatgttcaataccttttttatccag
tctcacattttgctgttgaactttgaagacatcgatatcttatgggatgccgatcacaag
ttcacaaagaacttcaaagcagaggtactcttttcagagtttgatgctgagtctgatgtg
tccacggaagtagcacatgatgatgatgatatcgatgttgcctctgctgatgagttcttt
gaagctgaagaaatcttcagtaatgctgactcccaagaaggacaaaaggatgccgatact
ctttctacaacctctacagactttggtccaactccaagagccgaacctcggaaaaactca
ccatttaccaattttgagctagatattggcatcaatggatcaggagacaataaaattgat
gaattgggtttgttgctagaaacaacaaatgatgaaaagacatgcacatccaatgaagcc
aatacgatgcacagcaacaaaactggagtagtgaagtcaagtttgccagctacaatagat
gaagacagagatgatgccatttcatgttcttcttccaacaaagaacatgactgtatgtta
gagaactgcagttccaagcatgacaaaagtatgggttccaatcaagactcgagtcagatt
gataatgtcttggtaaaggaggtgattatatcagaaactaatagtcctaaggacatacag
atgatcaaagaggtcatcatatctgaagttacagctcccaaactggtgttagaagggaat
aagatggacactgaattaggcgagacagtccacaatctagaaagtactacattggaagaa
gctgaggataagcaacaacttgatactttccccaaggatgagggagacagtgggggaggt
gaatatgctgcttatgacaatggcctagtgattgaacacgaagagagcagcaacgaacaa
aaacttcatatcagagatgcaaatgtacaagtgattggacccacagatgaaaataacagg
gtggcacttccactatcagggaaatcacatctgcagagctcaagcacttcttcagaatca
agttctgtcaagaaacaaatcaagcggcttcgtgcttgcggcagtaatggcactgttgaa
caaacggagggaattgatgcatcattttctagctcccagagccaatcttcgaatatttct
tctgtgaacattccaccagaaggatctaccattgccgtaacccatgttccaacttctgtc
aatgcaaagaaaaaacattttgttcctttgtctacaagtagtctttttgctcaatcgtct
cctaggcgcagtctgcttcgtgcagcatccacagatttgtcctttttatctccattacaa
agagaatctaagcagaactctgttgcttctacaagtggaagggatgattctgcttcatct
tctatgcctccaccatcttcactctatacaccctcgggatcatcatccaaaatatctcta
gtacacccccttctcagaccaataagaactgtttcatctctaccttcattaacatttgaa
gcttacatagagatgtcaatgtcttcttcaatatcgcccaaacaccaagagcatgttaaa
ccacatcttcccacagtacgaccacctcgaccactaaattttccttcttccaacaaatat
gatcctcactccccacgcccgcctccactgccacctccactcccacctccacgtgatcct
tgcacccaaagtgattcaagcaccctaatatctgaacatggacaaacaagagctcatagg
tcttgttcctctagtcatgattgtatacaaactgttcttgacttaagtgattcctcatta
acttcaccttcaaaaactagtatagatacaacagaatgcctcttaggagcctctaatttg
gtagatgatgaagtagcaagtagacccgatacactaactggcatggatgtcccaactact
agtgaagatgcaaattctttgttgcatttggagccctgcaatgtggagatatcacagagt
gaaacaatcaatggagtcttgcccgctatagttgatgataaagaacatggaggcattcca
attcaaccatcaccacaaaaatcgtctcagcctataattttctctcctccaccaccgcca
ccaccaccatcatgtcatgcaacaattgtaacatctccatgtttatctttaattccactt
tctccaagaaaacattatgaaaatacaccttccccaccccctcctccacctttttctaga
gaagcttttgtagctccacctccacctccactccctaatcgtccatctccccgtagaaaa
catattactccacctccatcgcctccttcacaatcacctacaaggcatattatacctcca
cctccaccaccacctttacgttatattgcatctccatctccgtgttcataccaacctcat
tttcagaaagatgtagcaatcccaccttctcctctcttagaggaccatgtagtagtttca
tctccacctttaacaagggttgataaaattccgctgcccccgccgccgccgccaccacca
tcaccaccacctagagggagtgaaattttatcaccaccttctattgagagtacaaaatcg
ccacggaaagctcaagtcactaaacaaattccacctccacctcctctccctaaagaacaa
aaaggatctccactgcctactctttgtggaggaattatgaactttccaccacatctacct
cctggaggacatagggaagctccactaacagctccctcgagagaattaaggggcattcca
ccaccaccaccccttactggagagctagggggaattcaattgccaattgaatttcaatgt
ggagatttgtcattgtaccaacctatcgaacgattggaaggtccttcacgatcgccacct
ccacctccaccaccaccaccaccaccatattccaatgaatatataggggatccaccaccg
ctaccaccttcaagagcatgtggaggggctccaccaccaccgccacatcctaaaggatat
gcaggggttccactacccccgccgcctcccggaggatatgtaggggctccttcgccaccc
cttggaggaaatgtagggtctccaccaccaccaccaccacctcctagaagatatatagag
gctcctcctccaccgccacctccaggagcgtatgtaggggctccaccaccaccaccacct
cctggagggtatgtaggggctccaccaccgccgccacctcccggaggatatgcaggggct
ccaccaccgccacctaccggagggtatgcaggggctccaccaccgccgccacgtcccgga
ggatatgcaggggctccaccaccaccgccacctcccggaggacacgttggggctccacct
ccaccgccacctcctggaggatacattggggctccaccaccaccgcctcgacctggaggc
attggaggagttcctcctcccccaccacctattggaggactaggaggcactccactgcct
ccaccgcctgctggatttcgaggtggagctccccctcctcctcctcctcctcctggaggt
catggaggacctccacctcctcctcctagaggacatggaggagtaggtggccctcctcct
cctcctggtgcacctgcccctccaatgcctcttggagtgcctggtgggccccctccacct
ccaggtggaagaggtatgcctactccacctggtggaagaggacatggccttgctcgagca
ttaggctcaaccttacaaagcgcagcacgaaggtcatctctaaaaccactacactgggta
aaagttacaagggcaatgcaaggaagtttgtgggcagagctacaaaagcaagtggatgcc
aatagtcatgctgaatttgatgtaaatgaactggagtctctgtttaccattgctccaaag
acaaaaggtggctcaaaatcagaaggacgtggaaaatctcttggatctaaaccggataaa
gttcaactgattgacctaagacgggccaataacacagagatcatgttgacaaaaattaaa
atgccactatctgatatgatgagtgctgctctagctttggatgattcagttttggatgct
gatcaaattgaaaatctcattaaattttgcccaacaaaagaggagatggagcttctaaag
aactacagcggggacaaggaagctcttggaaagtgtgagcatttctttctagagttaatg
aaggtgccaagggttgaatctaagcttagaatatttgctttcaagattcagtttcagtca
cagattagggatgttaggaagaatttgcagactgtgtcatccgcttgtgaggagctcaga
agctctgagaagttgaaggtcatcatgaagaatattctgttaattgggaatacattgaac
caaggcactccaagaggtcaggctgttggttttcgcttggacagcctcttaaaacttata
gagacccgtgccactaatggtagaatgacattaatgcactttctatgtaagtcccttgca
gagaagtcaccagaagtaatggattttcatgaagatcttgtcagcttggaagcttcttca
aagttgcaactgaaagcattggcagaagagcagcaggcagtcgtaaaagggctggagaaa
gttgaactggaactaactgcttcagaaagtgatgggccagtttctgatgttttccgtaag
accttaaaggagttcattgattgttctggtgctgatgtgcgttccctatcagcattttat
tctgaagtaggtaaaagtgcagatgcacttgccctttattttggagaagaccctgcaaaa
tttcctttcgagcaagttgctacaactcttctgacctttgtgggattgtttcggaaagct
catgatgagaacctcaagcagattgaggctgagaagaagaaagcccagaaagaggccgaa
aaagaagcaaaccaggacaaaactcctgtaaagtcaaaaaatgggaatgaggacaaatca
ccaagatcaccatcagccttcaaatag
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