Panicum virgatum (switchgrass): 120666632
Help
Entry
120666632 CDS
T07260
Name
(RefSeq) phosphoribosylamine--glycine ligase-like isoform X1
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00230
Purine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120666632
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
120666632
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_2
ATP-grasp_5
Dala_Dala_lig_C
RimK
ATP-grasp_4
Motif
Other DBs
NCBI-GeneID:
120666632
NCBI-ProteinID:
XP_039802445
LinkDB
All DBs
Position
3N:complement(3712269..3716856)
Genome browser
AA seq
537 aa
AA seq
DB search
MPCFLLAVSTAQEERVMASASPSTRASFKCGPKAFRNSHLHGYLKSVVSFPVSQASDSLY
SPIRVANRAYGSNLIVTALKSTGLNTALSSTNGSLKVPEERVTVLVIGGGGREHALCYAL
KRSPSCDAVFCAPGNSGIAQSGDATCIPDLDITSSEAVISFCRNWGVGLVVVGPEAPLVA
GLANDLVKAGIQTFGPSSEAATLEGSKDFMKKLCDKYNIPTAKYQTFTNPADAKQYVKDQ
GAPIVVKADGLAAGKGVVVAMTLDEAFEAIDTMLVEGSFGSAGSRVIIEEFLEGEEASFF
ALVDGETALPLESAQDHKRVGDGDVGPNTGGMGAYSPAPIVTEELKKKVMESIILPTVKG
MAAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMMRLESDLAQVLLAACRG
ELGKVSLTWSAELATVVVMASEGYPGAYKDGTVIRNLDEAEQVSPAVKIFLAGTAFDTDG
NFVAAGGRVLGVTAKGKDIEETRAKAYDALDIVDWPEGFYRHDIGWRALKHRHMFAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgccctgctttcttcttgccgtgtctacggcgcaggaggaaagagtgatggcaagcgct
tctccgagcaccagagcttcgttcaagtgtggaccgaaggcgttcaggaacagccacctg
catggttacctgaaatccgtagtgtcgtttcccgtttctcaggcatcggatagtctttat
tctcccatcagagtggcgaatcgtgcctacggttcgaacctgatcgtcacggctttgaag
agcacaggcctgaacacagcactctcttcgactaatggcagcctgaaggttcctgaagag
agggtgactgtactggtcattggtggaggaggaagggaacatgcactatgttatgcctta
aaacgctctccatcctgtgatgcagttttttgtgctcctggtaattctggcattgctcag
tccggagatgccacatgtataccagacctggacataactagtagcgaagctgtcatctca
ttctgtcgtaattggggtgtcggattagtcgtagttggacctgaagcacctctagttgct
ggtcttgcaaatgaccttgttaaagctggaatacagacttttggaccttcatcagaagct
gctacactggaagggtcaaaggatttcatgaagaagctgtgtgataagtacaacattcca
acagcaaagtatcaaacattcacaaaccctgctgatgctaaacaatatgtaaaggatcaa
ggagcccctatagttgtcaaagctgatggattggctgctgggaagggtgtagttgttgct
atgactttagatgaagcgtttgaagccatagacactatgctggtggaaggctcttttggt
tctgctggatcacgcgttatcattgaagaatttttagagggagaagaagcttctttcttt
gcattagtagatggagaaactgctttgcctctcgaatctgcccaggaccataaaagagtt
ggtgacggtgatgttggtccaaatactggtggtatgggtgcatactcgccagcaccaata
gtgacagaagaactgaagaagaaagtaatggaaagtataattctcccaactgtaaaaggt
atggcggccgaaggatgtaaatttgttggtgtgttatatgctgggcttatgattgagaag
aagtctggactacctaagcttattgaatataatgtacgatttggagatccagaatgtcag
gttctaatgatgaggttagagtccgacttggcacaggttctccttgctgcttgtcgggga
gaactaggcaaggtttcactaacctggtcggctgagttggcaacagtggtcgtgatggca
agtgaagggtaccctggggcttacaaggacgggactgtaataagaaatcttgacgaagct
gagcaagtttctcctgcagtaaagatattccttgcaggaactgcctttgatacagatgga
aactttgtagcggctggaggacgcgtgcttggagtcactgcaaagggcaaggacatcgag
gaaacaagggccaaagcttatgatgcgctcgacattgttgactggccagaaggattctac
aggcatgacattggttggagggctctgaaacatcggcatatgtttgcacactga
DBGET
integrated database retrieval system
