Panicum virgatum (switchgrass): 120666677
Help
Entry
120666677 CDS
T07260
Name
(RefSeq) adenine DNA glycosylase-like
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120666677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120666677
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
120666677
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120666677
Prokaryotic type
120666677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Whib
Motif
Other DBs
NCBI-GeneID:
120666677
NCBI-ProteinID:
XP_039802515
LinkDB
All DBs
Position
3N:complement(4243661..4246469)
Genome browser
AA seq
463 aa
AA seq
DB search
MAKNPKAADSRRGRPPTRRSQPRRAKAAPVASSSAGDIEDMAPAVPGASAVLRAQLLRWY
DAHRRELPWRRASGGEEERAYAVWVSEVMLQQTRVPVVVGYYERWMARWPTVRSLAAATQ
EEVNEMWAGLGYYRRARFLLEGAKQIVEKGEFPRTASALRDVRGIGDYTAGAIASIAFNE
VVPVVDGNVVRVISRLYAITDNPKESSTVKRFWELAGQLVDPSRPGDFNQAMMELGATLC
SKSKPGCSGCPVSSHCQALALSLENPSVQVTDFPRVVPKAKPRSDFAAVCVVQIAQGLEE
EVTDAKGNDNLFLLIKRPEEGLLAGLWEFPLLLVDEAKTDLLNRRKAMDKYLNKLLSINV
RQKSDVILREDVGEHVHIFSHIRLTMYVELMIINLKDGVDRQCQKEDDSTKLKFINESSM
ESMGLTSGIRKVYNMVKAFKEKSLYVSEKGQVPTRKRSRRLKQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaccccaaggcggcagacagccgccgcggccggcctcccacccgaaggtct
caaccgcgccgcgccaaggcggcgccggtggcctcctcatccgctggcgacatcgaggac
atggctcccgcagtgcccggggcctcggcggtgctgcgcgcgcagctgctccggtggtac
gacgcgcatcgacgcgagcttccatggcgacgcgctagcggaggcgaagaggagagggcg
tacgcggtgtgggtatcggaggtgatgctgcagcagacgcgggtgcccgtcgtggtcggc
tactacgagcggtggatggcgcggtggcccaccgtgcggagcctcgccgccgccacgcag
gaggaggtgaacgagatgtgggcggggctcggctactaccggagggctcgatttctgctg
gagggagcaaaacagattgtcgaaaagggggagtttcctcgcacggcgtcagcccttcgt
gacgttcgtggaatcggggattacacggctggagccatcgcttccatagccttcaatgag
gttgtccctgttgtggatggaaatgtggtacgagtgatcagcaggctttatgccattacc
gacaacccaaaagaatcctcaacagtgaagagattctgggaacttgcaggtcagctggtt
gatccttcaagaccaggagactttaaccaagcaatgatggaattaggagcaacattatgc
agcaagtcaaagcctggttgctctgggtgcccagtctcaagtcactgccaagcgcttgca
ctttcactggaaaatccatcagtccaagttacagacttcccacgagtggttccaaaggcc
aaacctcggagtgactttgctgctgtttgtgtcgttcagatcgcacaaggcttggaggaa
gaggtgacagatgcaaagggcaatgacaatctctttttgctgatcaagagaccggaggag
ggcctgcttgcagggctctgggagttcccactgctccttgtggacgaagcgaagactgat
ttgctgaacaggaggaaagcgatggacaagtatttgaataagttgcttagcatcaacgtg
agacagaaatctgatgtgatccttcgtgaggatgttggtgagcatgtccatattttctcc
catattcgcctgacaatgtatgtggagctgatgattattaatctcaaagatggtgtggat
cgacaatgccaaaaggaagatgatagtacaaagttgaaattcatcaacgagtcctcaatg
gagtccatgggattaacgtctggtattcgcaaggtgtacaacatggtcaaggctttcaag
gagaaaagcctctacgtatctgagaaaggtcaagtacccacgaggaaaaggagtagacgg
ttaaagcagtaa
DBGET
integrated database retrieval system
