Panicum virgatum (switchgrass): 120666693
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Entry
120666693 CDS
T07260
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120666693
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120666693
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Others
Others
120666693
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120666693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
DYW_deaminase
PPR_1
E_motif
PPR_3
PPR_long
Eplus_motif
TPR_15
Motif
Other DBs
NCBI-GeneID:
120666693
NCBI-ProteinID:
XP_039802544
LinkDB
All DBs
Position
2K:11857931..11861829
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AA seq
726 aa
AA seq
DB search
MARAARSRAVATLLSPPPSVSSPSAAGLLPWARDLVGRATEADLSRTPRERTRGSILACL
VKARGFRDARGAFDGTPKRSLPAWATVISGCARVGRHADGMRAFVEMLGGGGVPAPNAFV
LAGVLRCCAGLGDVESGRRVHGWILRSGVRQDVVLCNAVLDMYTKCGHHDRARRAFGAMV
EKDAVSWNIVLSACLQSGDVLGAMRLFDQSPLRDISSWNTIISGLMRNGCAAEAVDRLQQ
MVRAGVVFNHYTYSTAFALAGMLSLLDLGRQLHGHAVMSALEDDAFVCCSLMDMYCKCGE
MEAALSIFDRWSRFTGDMKFAWSTMVAGYVQNGREEEALEFFRMMLREGVPAEPFILTSV
AAACAHAGMVEQGRQVHGFVEKMGHRFDAPLASAIIDMYSKCGSLEDACRMFDRARAMNV
ALWTTMLCSYASYGQGREAIEIFNRMRAEKITPNEITLVAVLSACSHSGLVSEGDHYFKL
MQEEYGIVPSIEHYNCMVDLYGRAGLLDKAKNFIEENNISNEAIVWKTLLSACRLHKHME
YAKLATEKLVQLRQCDDGSYVLMSNIYATNSKWLDALKLRSSMQKRKVGKQPGQSWIHLK
NAVHTFIAGDMAHTRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDVEEEQRETTLKFHSE
RLAIAFGIISTPIGMPLRIFKNLRVCEDCHEAIKYISRAVDREIVVRDLYRFHHFKSGSC
SCEDFW
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcggcaaggagtcgcgccgtggccacgctgctctcgccgccgccgagtgtc
tcctctccctccgccgccgggctcttgccatgggcccgtgatctcgttggaagggcgacg
gaagcagacttgtctaggacgccccgggagcgcacacggggctctattctggcctgcctg
gtcaaagctcgtggcttccgcgacgcgcgcggggcattcgacggaacgcctaagaggagc
ctgccggcgtgggcgacggtcatctccggatgcgcgcgcgttgggaggcacgcagacggc
atgcgtgcgttcgtggagatgctgggcggaggcggcgtgcccgcgcccaacgcctttgtc
ctcgcgggcgtcctccggtgctgcgcggggctcggcgacgtggagtccggcaggcgcgtg
cacgggtggatactgcggagcggcgtgcgccaggacgtggtgctctgcaatgcggtcctc
gacatgtacaccaagtgcggccaccacgaccgcgccaggcgggcgtttggggcgatggtg
gagaaggacgcagtctcctggaacatcgtgctcagcgcgtgtctccagagcggggacgtt
ctgggggccatgcgtctgttcgatcagtcaccattgcgagacatttcgagctggaatacg
atcatcagcggccttatgcggaatgggtgcgccgctgaggcagtggatcgtctgcagcaa
atggtgcgagctggggttgtgttcaatcactatacttactccacggcgtttgccttggcc
ggcatgctgtcgttgttggacctaggccggcagctccatggtcatgcggtgatgtctgct
ttggaggatgacgcatttgtctgctgctctctcatggacatgtactgcaagtgcggtgaa
atggaggctgctctgtcaatctttgatcgctggtcacggttcacaggagacatgaaattt
gcatggagcacgatggttgctgggtatgtccagaatggcagagaggaggaagctctcgag
ttcttccgcatgatgctgcgtgaaggagttcctgcggagccgttcattctcaccagcgta
gctgcagcgtgtgcacatgcgggaatggttgagcaaggccggcaagtgcatggatttgtt
gagaagatgggccacagatttgacgcgccattggcatctgccataattgacatgtattca
aagtgtggtagccttgaagatgcttgcaggatgttcgacagggctcgggccatgaatgtt
gctctatggactacaatgttgtgctcctatgcatcgtatgggcaaggaagagaggctata
gagatcttcaacagaatgagagcggaaaagattacaccgaatgagataacccttgtcgct
gttctatcagcttgtagccatagcggattagtcagtgaaggagatcactatttcaagctt
atgcaagaagagtatggaattgttccaagcattgagcactacaattgcatggttgatctt
tatggtcgagctggactacttgacaaggcaaagaacttcatcgaggaaaacaacatcagc
aatgaagctattgtttggaagacattgctgtcagcctgtcgacttcacaagcacatggag
tacgcaaaattggctactgaaaagttggttcaactaagacaatgtgacgacggatcatat
gttctaatgtctaacatatatgccaccaatagcaaatggcttgacgctttgaagctcaga
agttcaatgcaaaaaaggaaagtcgggaagcagccaggccaatcttggatccatctgaag
aatgctgtgcatacatttattgcaggggacatggcacacacgagatcagctgaaatttat
gcttacttggagaaactgatggagaggctgaaggaaatggggtacacaagtagaactgat
cttgtggtacatgatgttgaggaggaacagagagaaacaactctgaagttccacagtgag
aggcttgccattgcatttgggatcatcagcaccccgattgggatgccacttcggatcttc
aagaatctgcgtgtttgcgaggactgccatgaggcaatcaagtatataagccgagctgtg
gatcgcgagatagttgttcgagacttgtatcggtttcatcatttcaagtctggtagttgc
tcttgtgaagatttctggtga
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