KEGG   Panicum virgatum (switchgrass): 120666732
Entry
120666732         CDS       T07260                                 
Name
(RefSeq) ras-related protein RABE1c-like
  KO
K07901  Ras-related protein Rab-8A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120666732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120666732
   03036 Chromosome and associated proteins [BR:pvir03036]
    120666732
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120666732
   04031 GTP-binding proteins [BR:pvir04031]
    120666732
Membrane trafficking [BR:pvir04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    120666732
 Autophagy
  Other autophagy associated proteins
    120666732
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    120666732
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120666732
  Exosomal proteins of other body fluids (saliva and urine)
   120666732
  Exosomal proteins of colorectal cancer cells
   120666732
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    120666732
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_29 C2c1_Nuc-II PduV-EutP MCM AAA_22 AAA_16
Other DBs
NCBI-GeneID: 120666732
NCBI-ProteinID: XP_039802588
LinkDB
Position
2K:11882591..11886496
AA seq 212 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILIGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR
LAETDSKPEERTISINRPEDASTPQKSACCGS
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcggcgccaccggcgagggcccgggccgactacgactacctcatcaagctgctactc
atcggcgacagcggtgttgggaaaagttgtctccttttacggttctcggatggctccttc
accactagctttatcaccaccattgggatcgacttcaaaataagaacaattgaacttgat
ggtaagcgcataaagttgcagatctgggatactgctggccaagaacgtttccgaactatt
acaactgcctactacaggggagcaatgggcattttgctcgtctatgatgttactgacgag
tcgtcgttcaacaatataagaaattggattaggaatattgagcaacatgcttccgacaat
gtgaataaaattttgataggcaacaaagccgacatggatgaaagcaaacgggctgtacca
acatctaaagggcaggctcttgctgacgagtacggcatcaagttctttgaaacgagtgca
aagaccaacttgaatgtggagcaggttttcttttcaatagcaagagatatcaagcaaagg
ctagcggaaaccgactcgaagccagaggagcgtacgatcagtattaacagacctgaggac
gcttcaacaccacagaagtcagcatgctgcgggtcctaa

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