Panicum virgatum (switchgrass): 120666755
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Entry
120666755 CDS
T07260
Name
(RefSeq) putative disease resistance protein RGA1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120666755
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Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
LRR_RPS2
LRR_13
LRR_Zer-1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
120666755
NCBI-ProteinID:
XP_039802609
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Position
3N:complement(64910281..64914170)
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AA seq
410 aa
AA seq
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MAKDLDLLNYLEPPSDIEKLRISGFRGLQLPHWMIKQSSSNDLSDIQKLKQSYLPQFSSL
SKLVLENIPNLVHLQGLKDLPGIKILKLRAMPKLVEFLTTATGLAKGDNEDEVQYCFPHL
STLVISDCPKLKVKPYFPLSLRELTMEGNNEQLLSSDSFLCPRPAHCDVSLPFSCIVDVK
PPHITQLKLGGLIGSPSGWELLQHLNGLRELEISMCKELRELPESMRSLTCLQKLDINWC
DSLVLPEWLGELQSLQRLRIIGLPLMSSLPQSIQSLTSLQDLSIYYCHALHRLPEQLGEL
CSLHRLELCNLPALTSLPESMQRLTSLQFLNFSACHALTQLSESFGELPALQTFWIQGCP
GLASLPCCIKHITALEELRISNCPELVKRCKERVGEDWHLVSHIPYLTLV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacctggatttgctcaactatcttgaaccaccgtcagatattgagaagctg
agaattagtggttttcggggtttacaattgccacattggatgataaagcaaagtagttct
aatgatctgtctgatatacagaagctaaagcaaagctatctacctcaattctcctctctg
agtaaactagtgttggagaacataccaaacttggtgcacctgcaggggcttaaagatttg
cctgggataaaaattcttaagctgagagcaatgcctaagctggtggagtttcttactact
gcaactggtttagcaaagggggataatgaagatgaagtgcaatattgtttccctcacctt
tccactctagtcataagtgactgtccgaaactgaaggtcaagccatactttccactgtct
ttaagagaattaacaatggaaggaaacaatgagcagttgttgtcctcggatagcttcttg
tgtccacgtcctgctcattgcgacgtgtctttgcctttctcctgtattgtggatgtgaag
cctcctcacatcactcaactaaaacttggaggattgatcggatcaccatctggttgggag
ttgttgcagcacctcaatgggcttcgtgaattggaaatctccatgtgcaaagaactgaga
gagttacctgagagcatgaggagcctcacctgcctacaaaaactggatattaattggtgt
gatagtcttgtgctgccggagtggcttggagaattgcaatctctacagaggttgagaata
ataggtctcccactaatgtccagcctccctcaatcaatacaaagcctcacatccctccaa
gacctctctatatattattgccatgccctccaccggctgcctgagcaactcggggaactc
tgctctctgcatcgccttgaattatgtaacttgcctgctctgacatcccttcccgagagc
atgcagcgcctcacctcacttcaatttctcaacttttctgcttgtcacgcattgacacag
ctttcggagtcatttggtgaactccctgcacttcaaacattttggatccagggttgccct
ggtcttgcttccttgccctgctgcataaaacacattactgctctagaggaattaaggata
tccaactgccccgagctggttaagcgttgcaaggaaagagttggggaggattggcacctt
gtatcccatattccgtatttgacgctagtctaa
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