Panicum virgatum (switchgrass): 120666848
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Entry
120666848 CDS
T07260
Name
(RefSeq) auxin-responsive protein IAA30-like
KO
K14484
auxin-responsive protein IAA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120666848
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Motif
Pfam:
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
120666848
NCBI-ProteinID:
XP_039802766
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Position
3N:complement(65908265..65912721)
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AA seq
323 aa
AA seq
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MPLHCNRKPPPTTLFPLKAAKQEARQRASEQEAPRVLAEGTRRRGGDELSEVAAAAMAAD
LGFEETELRLGLPGGGGGGGGDGEGTRSASGKRGFAETIDLKLKLEPAAAAVVEEEKEVV
DAAEEAAAAEESPAGKMKRSPSQSSVVTAAAQPDPAEKPRAPKAQVVGWPPVRSFRKNIM
SVQSEKGTGSKDADADKSSPAAGGGAAFVKVSLDGAPYLRKVDLKMYKSYQELSKALEKM
FSSFTIGSCGSQGMNGMNESKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRL
RIMKGSEAIGLAPRAMEKCKNRN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacattgcaatcgcaagccccctcctaccaccctcttccctctcaaagcagcc
aagcaagaagccaggcagcgagcgagcgagcaagaagcgccgcgcgtgctagcagagggg
acaagaaggcgaggaggtgacgagctgagcgaggtggctgcggcagcaatggcggcggac
ctggggttcgaggagaccgagctccggctgggcctgcccggcggcggcggaggcggaggg
ggagatggcgaggggacaaggagcgcctccggcaagaggggcttcgccgagaccatcgac
ctcaagctgaagctggagccggcggcggccgccgtcgtggaagaggagaaggaggtggtg
gatgccgccgaggaggccgcggcggccgaggagtccccggccgggaagatgaagcggtcg
cccagccagagcagcgtcgtcaccgccgccgcgcagcccgaccccgccgagaagccgcgc
gcccccaaggctcaggtggtcggatggccgccggtgcgctcgttccggaagaacatcatg
tccgtgcagtccgagaagggcaccggcagcaaggacgccgacgccgacaagtcctcgccg
gcagccggcggcggcgccgcgttcgtgaaggtgagcctggacggcgcgccgtacctgcgc
aaggtggacctcaagatgtacaagagctaccaggagctgtccaaggctctcgagaagatg
ttcagctccttcaccattggaagctgtgggtcccaagggatgaacggcatgaacgagagc
aagctggtggatctgctcaacggctccgagtacgtgccgacctacgaggacaaggacggt
gactggatgctcgtcggcgacgttccgtgggagatgttcgtcgaatcgtgcaagcgcctt
cggatcatgaagggatcagaagccattggcctggcgcccagggccatggagaaatgcaag
aacagaaactga
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