Panicum virgatum (switchgrass): 120666874
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Entry
120666874 CDS
T07260
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir01100
Metabolic pathways
Module
pvir_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120666874
Enzymes [BR:
pvir01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
120666874
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GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_D23
Biotin_lipoyl_2
HlyD_3
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
120666874
NCBI-ProteinID:
XP_039802793
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Position
3N:66394998..66403165
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AA seq
757 aa
AA seq
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MASRLLRLHLRRRGSPAGPAPPPLPLLLAARLLSSSSAPSPAAAAGAGIEKVLVANRGEI
ACRVMRTARRLGVATVAVYSDADRGALHVRAADEAVRIGPPPARESYLNAKAIIDAAHRT
GAQAIHPGYGFLSESADFAQLCEAEGLKFIGPPASAIRDMGDKSASKRIMGAAGVPLVPG
YHGAEQDIELLKLEADKIGYPVLIKPTHGGGGKGMRIVQRPDEFVDSVLSAQREAAASFG
VDTLLIEKYITQPRHVEVQVFGDQHGNVIYLYERDCSLQRRHQKIIEEAPAPNVTAEFRS
HIGGAAVSAAKAVGYYNAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQ
IRVANGECLPLSQEQVPLHGHAFEARIYAENVPRGFLPATGTLHHYRPVPSAPTVRVETG
VEEGDTVSMHYDPMIAKLVVWGESRSAALVKLKNCLSNFQIAGLPTNVGFLQELASHSAF
EKGIVDTHFIERYKDDLLSTSTKASGESHGVAELGAILAAACICKKDHITSKESIRADKT
LSVWYNNTPFRMHHSARQPLELELEEHDGFSEKLLKLFVTYKCDGSYFIETEEGTSGFDV
KVEHKGDHDFRVDAAGLQTDVTLAYYSKDNSKHIHIWHGKHHHHYRQTLRAQHGADDSSQ
PTHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVEAGQPVMVMEAMKMEHVVKAPRAGYV
EGLKVTAGQQVFDSSVLFTIKDNSANWDGANAVLPWR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgcctcctccgcctccacctccgccgccgcgggagccccgccggtcccgcg
ccgcccccgctcccgctcctcctcgccgcgcggctcctctcctcctcctccgccccctcc
cctgccgcggcggcgggcgcggggatcgagaaggtgctggtggctaaccggggcgagatc
gcgtgccgcgtcatgcgcaccgcgcggcgcctcggggtcgccaccgtcgccgtgtacagc
gacgccgaccgcggggcgctgcacgtgcgcgccgccgacgaggccgtcaggatcggcccg
ccgcccgccagggagagctacctcaacgccaaggccatcatcgacgccgcccaccgcacc
ggcgcccaggctatccacccggggtatgggtttctttcggagagtgctgattttgcgcag
ctctgtgaagctgaggggctcaaattcattggcccaccggcatctgcaattagagatatg
ggtgataagagtgcatccaagaggatcatgggtgctgctggagtgccgctagttccagga
taccatggggctgaacaagatattgagctcttaaaacttgaagctgataaaattggttat
ccagttttgatcaagcctacccatggtggagggggcaaggggatgaggattgttcagcgg
cctgatgagtttgtggattctgtactgagcgctcagcgggaagctgcagcatcatttggt
gtagacacgctattgattgagaagtatattactcaacccagacatgtagaagtccaggta
ttcggagaccaacatggaaatgtaatatacctttatgagagagactgcagtctacaaaga
aggcatcaaaagattattgaggaagctccagctccaaatgttacagctgagtttcggtct
catattggtggagctgctgtgtctgcagcaaaggcagttggttactacaatgctggaaca
gtggagtttattgtggacactctttctggagaattctactttatggagatgaatactcga
ctccaggttgaacacccagtgacagagatgattgttggtcaagatcttgtggagtggcaa
atacgtgttgcaaatggagaatgcctaccattatcacaggaacaggtcccattacatgga
catgcatttgaagctaggatatatgctgaaaatgttccaagaggatttcttcctgcaaca
ggaaccttacatcactacagacctgtcccttcagccccaacagtaagagttgaaactgga
gttgaagaaggagatactgtcagcatgcattatgatcccatgatagccaaacttgtagta
tggggtgaaagtcgcagtgctgcactagtcaagctaaagaactgtttgtcaaactttcag
attgcaggtttgccaaccaatgttggttttctccaagaactcgcaagtcatagtgccttt
gaaaaaggcatagtcgatacgcacttcattgagcgttataaagatgatcttttgagtact
tctacgaaggcctcaggtgaatcgcatggtgtagctgagcttggtgcaattctggctgct
gcgtgcatttgcaagaaggatcacattacatcgaaagaatcaatacgagctgacaagaca
ttgtctgtatggtacaataatacaccttttaggatgcatcactctgctaggcaaccactg
gaattggagttggaagaacatgatggattcagtgagaaactgcttaaactattcgttaca
tataagtgtgacggaagttacttcatcgagacagaagagggcacttctggttttgatgtc
aaagttgaacacaagggtgaccacgattttcgtgtagatgctgctggtctgcaaactgat
gtgactctagcttattattcaaaggataatagcaaacatatacacatctggcatgggaag
caccatcaccattatagacagactctgagagctcagcacggagctgatgatagctcccag
cctactcatgcttctgaggggaagtcacatccaaaaggcagtgttctggcaccgatggct
ggtttggttgtgaaggttttgcttgaagatggggcgcaggtggaggcagggcagcctgtc
atggttatggaagcaatgaagatggagcatgtggtgaaggcgcctcgtgctggatatgta
gagggcctgaaggtcactgctggccaacaagttttcgattccagtgtccttttcacaatc
aaggacaactctgcaaactgggatggagcgaatgcagtcctgccgtggagatag
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