Panicum virgatum (switchgrass): 120666945
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Entry
120666945 CDS
T07260
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
KO
K14830
protein MAK11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120666945
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120666945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Mito_fiss_Elm1
Beta-prop_NOL10_N
PQQ_2
Beta-prop_IFT140_1st
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
120666945
NCBI-ProteinID:
XP_039802873
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Position
3N:67317354..67319605
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AA seq
326 aa
AA seq
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MALVAGSYERFIWGFSLKTLTTSAAAADSSSETLTLVPLFSYPAHTGPVRCVAAAPRAGL
AASGGADDSVRLYDLPTAADLGPLLDPSAAVSALAFYSRGPVPRNLLAACDDGALHLYDA
DGFALLATLRAFPRHEAAEDLAVHPSGRVALAVGRSGALAMVNLVRGRRSFACRLERPAS
AVSYAEDRDGGDRFVMAAEEKVTVHDSEDARIIHQMDCSKRVLAMAPAKNGVLYTGGEDR
GITAWDLSSGKVSSRIEDAHATRVKGVVVFYTRKDGSELSNLIASASSDGVIRVWDVRTI
GNAKPTPLAEANTKARLTCLAGTSLK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtcgccggctcctacgagcgcttcatctggggcttctccctcaagaccctg
accacctcggccgccgccgccgactcgtcgtccgaaaccctcaccctcgtgccgctcttc
tcctacccggcccacacgggcccggtccgctgcgtggccgcggcgccgcgtgcggggctc
gcggcctccggaggcgccgacgactccgtccgcctctacgacctccccaccgccgccgac
ctcggcccgctcctcgacccgtccgccgccgtctccgcgctcgccttctactcccggggc
cccgtgccgcggaacctcctcgccgcctgcgacgacggcgcgctccacctctacgacgcc
gacggcttcgcgctcctcgccacgctccgcgcgttcccgcgccacgaggccgcagaggac
ctcgccgtgcacccgtcgggccgggtcgcgctcgccgtcggccgctccggggcgctcgcc
atggttaacctcgttcgggggcggcgcagcttcgcgtgccgcctcgagcgccccgcgtcg
gcggtctcgtacgcggaggacagggatggcggggatcgattcgtcatggcggccgaggag
aaggtgaccgtgcacgactccgaggatgcgaggattattcatcagatggactgcagcaag
agggtgctcgccatggcgcctgcaaagaatggagtcctttacactggaggagaggaccgt
ggtattactgcttgggatttgtccagcggcaaggtctcctcacgcattgaggatgctcac
gcaactcgtgtaaaaggggtcgttgttttttatactcggaaggatgggtcagagctctcc
aatctaattgcttctgcttcatccgatggtgtcataagggtatgggatgttcggacaatt
gggaatgcaaagcctactccattggcagaggctaacacaaaagcaaggctaacctgtctt
gccgggacatcattgaaatga
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integrated database retrieval system
