Panicum virgatum (switchgrass): 120667026
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Entry
120667026 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 5-like
KO
K03352
anaphase-promoting complex subunit 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120667026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120667026
03036 Chromosome and associated proteins [BR:
pvir03036
]
120667026
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120667026
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120667026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC5
TPR_1
Apc5_N
TPR_2
TPR_12
TPR_8
Motif
Other DBs
NCBI-GeneID:
120667026
NCBI-ProteinID:
XP_039802968
LinkDB
All DBs
Position
3N:68645868..68655228
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AA seq
906 aa
AA seq
DB search
MSLFAGVGGGAGSADPVSAGGTGRALLELTPYKIAVCHLVQVFAPPGGDSVPPFPFESVA
HHNCLGLFLFTFTRSCDDFREPSLEELLRQLKVVDDLTNGWLCEQLTSTLSALNSPDDLF
NFFDKLRGVLTAPEGASAEDIFLDPNSQLGVFLRCCILAFNSMTFEGVCHLLADLVMYCN
STDASYDLAEVEDFDTEMNNLMDADIGSHAGIFGQGYASESHMGESSSALTRAPMSLHDF
DETNTFKVDDNPTCLRSRWQLEAYLNQQADILEKDPSSVPSNSFNATITQLQTLAPELHR
VQFLQYLNALCHDDYVASLDNLHRYFDYSAGMQGLFGRSMSSMQDIVVGKYESALLCLGN
LHCHFGHPKKALEAFAEAVRVSQMNNDDSCLAYVLGAISNLLSKIGMSNTVGIISSPYSL
GTNIGLGTPLSIQQQLLVLLKRSLKRADILKLASLLSFDHLSLAKFDLKHVQRPLVSFGP
NASTKLRTCPADVCKNLRLSTRVLTDFGTDALSTSNDNGSFSTSWLRNLSAASDSWHSSS
MKSTKLHNDFDNFHYHAQPSPVPAPVLQLAGSGYLLRATAWEHYGSVPMVRMNALVYATC
FADAASSSELSLAYVKLIQQLAVFKGYSAAFCALKLTEKKLPSSTSLHIQLLRMQILHER
ALHRGHLKVAQQICDEFGVLSSSVCGVDIELKIEASVRRARTLLAAKQYSQAAAVANSLF
STCYKYNMQVENASVLLLLAEIHRKSDNAVLGLPYALATQSFCKSFNLDLLEASATLTLA
ELWLALGSSHAKRALSLAHQSLPMILGHGGLELCARAHIVLAKCHLSDPEFSVFEKPEAV
LDPLNQATQDLQVLEYREMAAEAYYLKAMAYNHLGKLDEREEAAGCFKEHITALENPHNE
EDSLAY
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagcctattcgctggggtcggcggcggtgcggggtcggcggacccggtgtctgcgggc
ggaaccggcagggcgcttctagagctgacgccgtacaagatcgcggtgtgccacctcgtg
caggtcttcgcgccgccggggggcgactctgtgccgcccttcccgttcgagtccgtcgcc
caccacaactgcctcggcctcttcctcttcacgttcacccggtcgtgcgatgattttcgg
gagccttcactggaggaacttctgaggcagctgaaggtggtggacgatttgactaatggt
tggctctgtgagcagctgacaagtaccctgtcagcgctgaactcgcctgatgatttgttc
aactttttcgataagctacgaggtgtgctcactgcacctgaaggtgcaagtgccgaggac
atatttctggatccaaatagccagcttggagttttccttcgctgctgcatacttgccttt
aattcaatgacctttgagggtgtatgccatcttttggcagatcttgtgatgtactgtaac
tccactgatgcttcatatgacttggcagaagttgaggacttcgatactgaaatgaacaac
ttgatggatgcagacataggttctcacgctggtatatttggccaaggttatgcctctgag
agccatatgggggagagctcttcagctctaactcgcgcaccaatgtcactccatgatttc
gatgaaactaatacttttaaagtggatgacaacccaacatgtctgagatcaaggtggcaa
ttagaggcatatcttaaccaacaagctgatattcttgagaaggatcccagctcagtgcct
tcgaattcatttaatgccactataacacagcttcagacattagctccagagcttcatcgt
gtccaattcttgcagtacttgaatgcactttgccatgatgactatgttgcttcactggat
aatcttcaccgctactttgattacagtgcagggatgcaaggactttttggtcgttctatg
tcttcaatgcaagatattgttgttggaaagtatgagagtgccctactatgcttaggcaac
ttgcattgtcactttggacatcctaagaaagccctagaggcatttgcagaagcagtgcgc
gtttcgcaaatgaataatgatgattcatgcctagcctatgtattaggagcaatttccaat
ctattatcaaagataggcatgtcaaacacagttggaataatcagttcgccatattcactc
gggaccaatattggactgggcacaccattatcaattcagcaacagttacttgttctttta
aagagatcactcaagagagctgatatattgaaacttgctagcttactatcctttgatcac
ctttctctggcaaaattcgacctgaagcatgtccaaaggccactagtctcctttggtccc
aatgcatctacaaagctcagaacatgtcctgcagatgtctgtaagaatttgagattaagt
acccgtgtgttgactgactttggaacagatgctttatctacctcaaatgataatggtagt
tttagcacttcgtggcttaggaatctgtctgctgcttctgactcatggcatagcagttct
atgaaatctacaaagttacataatgactttgacaatttccattatcatgcacaaccaagt
ccggtacctgcaccagtattgcaattagctggctcgggatatttgttgagagccaccgca
tgggagcactatgggagtgttccgatggtacgaatgaatgctctggtctatgcaacttgc
tttgctgatgctgcaagttcatcagagttgtcactagcttatgtcaagctaattcaacaa
ttggcagtgttcaaaggatattctgctgcattttgtgctctaaagcttactgaaaagaag
ttgccatcctcaacaagtttgcacatccagcttcttagaatgcagatactacatgagcgt
gcacttcatcgagggcatctaaaagttgcacagcaaatctgtgatgagtttggggtgttg
tcatcttctgtctgtggagtagacatcgagctaaagatagaagctagtgtacgacgtgca
cgcactctacttgctgcaaagcagtatagccaggctgcagctgtggccaattctcttttc
tctacgtgctacaaatacaatatgcaagttgagaatgcaagtgttcttttattacttgct
gaaatacatagaaaatctgacaatgctgtccttgggctcccttatgcattagccacccaa
tcattctgcaaatcattcaacctggatcttcttgaggcctcagccacacttactcttgct
gagttgtggctggctcttggatcaagccacgcaaagagggccttgagtcttgcccaccag
agccttcccatgattcttggtcatggtgggcttgagctgtgtgctagagctcacattgtt
ttagcaaagtgccatttatctgatccggaattctcagtttttgaaaaacctgaagctgtc
ctggatcctttgaaccaagccacccaagatctgcaagttttggagtaccgtgagatggca
gcagaggcatactatctgaaggcaatggcatacaaccatctcggcaagctcgacgagagg
gaggaagccgcgggttgtttcaaggagcacatcactgccctcgaaaacccgcacaacgaa
gaggactcgcttgcgtactga
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