KEGG   Panicum virgatum (switchgrass): 120667049
Entry
120667049         CDS       T07260                                 
Name
(RefSeq) ras-related protein Rab5A-like
  KO
K07887  Ras-related protein Rab-5A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
pvir04145  Phagosome
pvir04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120667049
   04145 Phagosome
    120667049
   04148 Efferocytosis
    120667049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120667049
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120667049
   04031 GTP-binding proteins [BR:pvir04031]
    120667049
Membrane trafficking [BR:pvir04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120667049
 Endosome - Lysosome transport
    120667049
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120667049
  Exosomal proteins of other body fluids (saliva and urine)
   120667049
  Exosomal proteins of colorectal cancer cells
   120667049
  Exosomal proteins of bladder cancer cells
   120667049
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120667049
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_16 TsaE AAA_22
Other DBs
NCBI-GeneID: 120667049
NCBI-ProteinID: XP_039802993
LinkDB
Position
3N:68975529..68979179
AA seq 204 aa
MAATAGGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDET
VKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIM
ALAGNKADLVEARQVPAEEAKAYAQENGLFFMETSAKTAINVNDVFYEIAKKLLQGQQVQ
NPQGGMVLNQRPPERMVSSSSCCA
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcggccaccgccggcggcaacaaaatccgcaacgccaagctggttcttctcggggat
gtgggcgccggcaagtccagcctggttctccggtttgtgaaaggccagttcatcgaattc
caggaatcgaccatcggggcggctttcttctcgcagaccttggcagtgaacgatgagaca
gtcaagtttgagatatgggacacggcagggcaggagaggtatcacagcttggctcccatg
tattaccggggcgctgctgctgcgatagttgtctacgacatcacaaatgcggcctctttc
acacgtgcaaagaaatgggttcaagaacttcaagcgcaaggaaacccaaatacaataatg
gctcttgctgggaacaaggctgatttggtagaggcgaggcaggtgccagcagaagaagca
aaggcatatgctcaagagaatggtctcttcttcatggaaacatctgctaaaacggcgatc
aatgtgaatgacgtgttctacgagattgcaaagaaattgctgcaagggcagcaggttcag
aacccacagggtggaatggttctcaaccagagaccacctgagaggatggtgagctcttcc
tcctgctgtgcataa

DBGET integrated database retrieval system