Panicum virgatum (switchgrass): 120667171
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Entry
120667171 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase prpf4B-like isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120667171
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120667171
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120667171
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
120667171
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120667171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
DUF2340
Motif
Other DBs
NCBI-GeneID:
120667171
NCBI-ProteinID:
XP_039803159
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All DBs
Position
3N:complement(69778974..69789879)
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AA seq
943 aa
AA seq
DB search
MAAGGEPSLSPPPPRTSPAKHSRSPDDAQPDASPKRRKRHHHRRHHRHTGSPVAVAADDE
VEEGEILDDAAAAAAAMDVDADSAAPQASLVPEHLNNGADTDSNADATKLQASALPTLPS
LKDRRKSLNIAPESESGGILSSDAEDTKGYEQSQSLSKSPKSRKEKDRRRRDDRHSSSSK
DNHSKNHSRTSPHPRHHSEAHSRDHSRSREKSDGANGSRASLRDGSDHDSNDRNRKSGRH
TISRQENERERSSIHLVHDRPGDRHGSRERYRDVRIDRDKVDSLEATRRPRDRSRSRSRL
DLRECAQVRDQSRERERRSGSSRHKEHETKRDTSKDRHRESDRVDSVRERERVRDDRDRE
WHMVKGSESRRAIEGWDNVSDIERHGDSTRSRYGTSEGYKERARSREKDRDVDHKSWRSE
EMKKNSFNNEDDEEEYQEKIEQQLAMQEEDDPEKIKEEARRRKEAIMAKYRQQQFQKQHM
ESKLSSNNEEVRAMDGDETTHLKDDNDSSSTGNYEAENKHDSEVFTGKADFTVGKSPAPN
DTLVSTGAFSDERMIGVSGLGEGSPKSERSADIFCDDIFGESPAGIRKSGKDDGLHIERN
ALHDNWDDADGYYTYRFGELLDGCYEITAAHGKGVFSTVVRAKDLKAGKDDPEEVAIKII
RNNDTMYKAGRQEVSILEKLASADREDKRHCVRFISSFMYRNHLCLVFESLNMNLREVLK
KFGRNIGLKLTAVRAYSKQLFIALKHLKNCKVLHCDIKPDNILVNEAKNVLKLCDFGNAM
LAGMNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGPSNNAMLR
LHMELKGPFPKKMLRKGAFTMQHFDQDLNFHATEEDPVTKTAVRRLILNIKPKDIGSLIS
NFPGEDPKMLSSFKDLLDKIFILDPEKRMTVSQALSHPFITGK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcagccggcggagagccctccctgtcgccgccgccgccgaggacctcacctgccaag
cactctcgctcgcccgacgacgcccagcccgatgcctccccgaagcgccgcaagcgccac
catcaccgacgccaccaccgtcacaccggctctccggtagccgtggctgccgatgacgaa
gtagaggagggggagatactcgacgatgccgccgccgccgccgccgctatggacgtcgac
gctgattccgccgccccacaggcttcccttgttccggagcaccttaacaatggtgctgat
acagactcaaatgcagatgcaaccaagctgcaagcatctgctctgcctacccttccatcc
ttaaaagacagaaggaaatcacttaacattgcccctgagtctgaaagcggaggtatcctt
tcaagtgatgctgaggacaccaaagggtatgaacaaagccaaagcctttcaaaatctcca
aaatctagaaaggagaaggacaggaggcgcagagatgaccgtcactcttcgtcttctaaa
gataatcattccaaaaatcactctagaacatctcctcaccctaggcatcacagcgaagct
cactcaagggatcactcaaggtctagagagaaaagtgatggtgctaatggttctcgtgca
agtcttagggatggctctgatcatgacagcaatgatcggaatcggaaatctggcagacat
actattagcagacaggagaatgaaagggaaaggagcagtatccatcttgttcatgataga
cctggtgacagacatggtagccgggaaaggtatagggatgttaggatagatagagacaaa
gttgattcacttgaagccacccgtaggcccagagacagaagcaggagtcgtagtagattg
gatctaagggaatgtgctcaggttcgagaccaaagccgagaaagggaaagacggagtggt
agttcaaggcataaagaacatgagacgaagagggatacaagtaaagatcggcatagagaa
tctgacagggttgatagtgtacgtgaaagggagagagtgagagatgatagggacagggaa
tggcatatggttaagggaagtgaatctcgtagagccatagaaggatgggacaacgttagc
gatattgagaggcacggggattcaacgcgctcaagatacggcacatctgaaggttacaaa
gagagggctagatccagggagaaagatagagatgttgaccacaaaagttggaggtctgaa
gaaatgaagaaaaactctttcaacaatgaggacgatgaagaggagtaccaagagaaaatt
gaacagcagttagctatgcaggaagaagatgaccctgaaaaaattaaggaggaagcaagg
aggaggaaagaagccattatggcgaagtacaggcagcaacaatttcagaagcagcatatg
gaatccaaactaagtagcaataatgaagaagtaagagcaatggatggagatgaaactacg
catctgaaagatgataatgatagcagctctacaggcaattacgaagctgaaaataagcat
gattcagaggtttttactggcaaagcagacttcactgtggggaagtctcctgctcccaat
gatactttagttagcacaggcgcattcagtgatgagaggatgataggtgtttcaggtctt
ggagagggttctcccaagagcgagagatcagcagacatattttgtgatgacatttttgga
gaatcacctgcaggcattagaaaatcgggcaaggatgatggtttgcatattgagagaaat
gctcttcatgacaactgggacgatgcagatgggtactacacttaccggtttggggaattg
ctggatggctgttatgaaatcacagcagcacatgggaagggtgtgttctcaacagttgtg
cgggcaaaagatcttaaagctggtaaagatgaccctgaagaagttgctatcaaaattatt
cgcaacaatgatacaatgtacaaggctggtaggcaagaggtttcaatattggaaaaactt
gcaagtgcggatcgcgaggacaaacgccactgtgtgcggtttatttctagtttcatgtac
cggaaccatctttgcttagtttttgaatctctcaatatgaatcttcgtgaggtattaaag
aaatttggtcgtaatatcgggcttaaactaactgcggtgagggcatattcaaagcagctc
ttcattgccttgaagcacctgaagaactgcaaagttttgcactgcgatataaagccggac
aatattctggtgaatgaggctaagaatgtgctcaagctttgtgattttggtaatgctatg
cttgctggcatgaatgaggttacgccttaccttgtcagtcgtttctatcgggcacctgag
atcattcttgggttaccctatgaccatccattagacatgtggtcagttggctgctgtcta
tatgagctttacactgggaaagtcttgttcccaggtccatcaaacaatgccatgcttcgc
cttcatatggaattaaagggcccattccctaagaagatgcttcgaaaaggtgcctttaca
atgcaacactttgaccaggatcttaattttcatgctactgaggaggatcctgtgacaaaa
acggctgtgagaaggttaattttgaacattaaaccaaaggacattggttctttgatttcg
aactttcctggcgaggatccaaaaatgctgtccagttttaaagatctccttgataaaata
tttatcttagatccagaaaagaggatgaccgtatcacaagcacttagccatccttttatc
actggcaagtga
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