KEGG   Panicum virgatum (switchgrass): 120667209
Entry
120667209         CDS       T07260                                 
Name
(RefSeq) cullin-1-like
  KO
K03347  cullin 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120667209
   04120 Ubiquitin mediated proteolysis
    120667209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120667209
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     120667209
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120667209
NCBI-ProteinID: XP_039803207
LinkDB
Position
3N:complement(9824009..9829990)
AA seq 744 aa
MAGQERRTIDLEEGWAFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDR
YFISRRSLTPLKEVGLTCFRELIYQEIKGQVKDAVIALIDKEREGEQIDRALLKNVLDIF
VEIGLGQMDCYENDFEDFLLKDTTEYYSVKAQSWILEDSCPDYMIKAEECLKWEKERVGH
YLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCSALLRDDKVEDLSRMYRLFSKITRGL
EPISNMFKTHVTNEGTALVKQAEDSASSKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVT
DCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALE
KVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTVARDHQTKFEEFVAGHPELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEV
FKEFYQTRTKHRKLTWIYSLGTCNINAKFDAKPIELIVTTYQAALLLLFNGADRLSYSEI
VTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP
VDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKR
IEDLITRDYLERDKDNANMYKYLA
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcggggcaggagcggaggacgatcgatctggaggagggatgggccttcatgcagaag
ggcatcaccaaactgaagaacatccttgagggcaagcccgagccacagttcagctccgag
gactacatgatgctctacacgacgatatacaacatgtgcacgcagaagccgccgcacgac
tactcgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatcacctccatg
gtactgccttcgttaagggaaaagcatgacgagtttatgttgagggagctagtgcaaagg
tggtcaaaccataaagtcatggttcggtggctctcacgcttctttcactaccttgatcgg
tacttcatctcaaggaggtcacttaccccacttaaagaagttgggcttacttgcttccga
gagttgatttatcaagagattaaaggacaagtaaaagatgcagtgattgctctgatagac
aaagagcgtgaaggtgaacagattgacagggctttattgaagaatgtcctagacatattt
gttgaaattgggttgggtcaaatggattgttacgagaatgactttgaagacttcttgctt
aaggatactacagagtactactctgtcaaggctcaaagctggattcttgaggactcctgt
ccagattatatgatcaaggctgaggagtgtttgaagtgggagaaggagcgagttggtcac
tatttgcatattagcagtgaacagaagttattggagaaagtgcaaaatgaattgcttgct
caatatgcaactccgctgttggagaaggagcattcaggatgttctgctttgcttcgtgat
gataaggttgaggatctttctaggatgtacaggctcttctccaaaatcacccgtggtctg
gaacctatttctaatatgtttaaaacgcatgtcacgaatgagggtacagccttggtcaag
caagcagaagattctgctagtagtaagaagccagaaaagaaggatatggttggaatgcag
gaacaggtctttgtctggaaaatcatcgagttgcatgacaaatacgtggcttatgtgacg
gattgtttccagggccatacactgttccataaggcacttaaagaagcctttgaggtcttc
tgtaacaagggcgtctctggcagttcgagtgctgaattgctggctaccttctgtgacaat
attctgaagaaaggctgcagtgaaaagctcagtgatgaagccattgaagatgcccttgag
aaggtggtgaggttgctggcttacattagtgataaagatctctttgccgagttctatagg
aagaaacttgcaagaagattgctttttgacaaaagtgccaatgacgaacatgagagaagc
atcctgacaaagctcaagcaacagtgcggtggccagtttacttcaaaaatggagggcatg
gttacggacctcaccgtcgccagagatcatcaaactaaatttgaagagtttgtagctgga
catccggagttgaatcctggaatagacttggctgttactgttttgacaacaggattctgg
ccaagctacaaaacctttgatataaatcttcctgctgagatggtgaaatgtgtagaagtt
ttcaaggagttctaccaaacaagaacaaagcacaggaagcttacctggatttattccttg
ggcacctgcaacatcaatgccaagtttgatgcgaagcctattgaactaattgttacaaca
tatcaggctgcattgctactgctattcaatggagccgacaggcttagttattctgagatt
gtaactcaactaaacctgtcagatgatgatgtagtgcgcttgctccattcactctcttgt
gctaaatacaagattcttaacaaagagccagcaaacagatctatctctcccaacgatgtc
tttgagttcaattcaaaattcactgacagaatgagaagaataaagattcccctcccacct
gtcgatgagaagaaaaaagttgtcgaagatgttgacaaagacaggaggtatgcaattgat
gcgtcaattgtgcgcatcatgaagagccgtaaagttatgggtcatcagcagctagttgct
gaatgtgttgagcagctcagccgcatgttcaagcctgacttcaaagccatcaagaagagg
attgaggatctcatcacaagggactacttggagcgcgacaaggacaatgcgaacatgtac
aaatacctggcttga

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