Panicum virgatum (switchgrass): 120667209
Help
Entry
120667209 CDS
T07260
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120667209
04120 Ubiquitin mediated proteolysis
120667209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120667209
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
120667209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120667209
NCBI-ProteinID:
XP_039803207
LinkDB
All DBs
Position
3N:complement(9824009..9829990)
Genome browser
AA seq
744 aa
AA seq
DB search
MAGQERRTIDLEEGWAFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDR
YFISRRSLTPLKEVGLTCFRELIYQEIKGQVKDAVIALIDKEREGEQIDRALLKNVLDIF
VEIGLGQMDCYENDFEDFLLKDTTEYYSVKAQSWILEDSCPDYMIKAEECLKWEKERVGH
YLHISSEQKLLEKVQNELLAQYATPLLEKEHSGCSALLRDDKVEDLSRMYRLFSKITRGL
EPISNMFKTHVTNEGTALVKQAEDSASSKKPEKKDMVGMQEQVFVWKIIELHDKYVAYVT
DCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGCSEKLSDEAIEDALE
KVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGM
VTDLTVARDHQTKFEEFVAGHPELNPGIDLAVTVLTTGFWPSYKTFDINLPAEMVKCVEV
FKEFYQTRTKHRKLTWIYSLGTCNINAKFDAKPIELIVTTYQAALLLLFNGADRLSYSEI
VTQLNLSDDDVVRLLHSLSCAKYKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP
VDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFKAIKKR
IEDLITRDYLERDKDNANMYKYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcaggagcggaggacgatcgatctggaggagggatgggccttcatgcagaag
ggcatcaccaaactgaagaacatccttgagggcaagcccgagccacagttcagctccgag
gactacatgatgctctacacgacgatatacaacatgtgcacgcagaagccgccgcacgac
tactcgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatcacctccatg
gtactgccttcgttaagggaaaagcatgacgagtttatgttgagggagctagtgcaaagg
tggtcaaaccataaagtcatggttcggtggctctcacgcttctttcactaccttgatcgg
tacttcatctcaaggaggtcacttaccccacttaaagaagttgggcttacttgcttccga
gagttgatttatcaagagattaaaggacaagtaaaagatgcagtgattgctctgatagac
aaagagcgtgaaggtgaacagattgacagggctttattgaagaatgtcctagacatattt
gttgaaattgggttgggtcaaatggattgttacgagaatgactttgaagacttcttgctt
aaggatactacagagtactactctgtcaaggctcaaagctggattcttgaggactcctgt
ccagattatatgatcaaggctgaggagtgtttgaagtgggagaaggagcgagttggtcac
tatttgcatattagcagtgaacagaagttattggagaaagtgcaaaatgaattgcttgct
caatatgcaactccgctgttggagaaggagcattcaggatgttctgctttgcttcgtgat
gataaggttgaggatctttctaggatgtacaggctcttctccaaaatcacccgtggtctg
gaacctatttctaatatgtttaaaacgcatgtcacgaatgagggtacagccttggtcaag
caagcagaagattctgctagtagtaagaagccagaaaagaaggatatggttggaatgcag
gaacaggtctttgtctggaaaatcatcgagttgcatgacaaatacgtggcttatgtgacg
gattgtttccagggccatacactgttccataaggcacttaaagaagcctttgaggtcttc
tgtaacaagggcgtctctggcagttcgagtgctgaattgctggctaccttctgtgacaat
attctgaagaaaggctgcagtgaaaagctcagtgatgaagccattgaagatgcccttgag
aaggtggtgaggttgctggcttacattagtgataaagatctctttgccgagttctatagg
aagaaacttgcaagaagattgctttttgacaaaagtgccaatgacgaacatgagagaagc
atcctgacaaagctcaagcaacagtgcggtggccagtttacttcaaaaatggagggcatg
gttacggacctcaccgtcgccagagatcatcaaactaaatttgaagagtttgtagctgga
catccggagttgaatcctggaatagacttggctgttactgttttgacaacaggattctgg
ccaagctacaaaacctttgatataaatcttcctgctgagatggtgaaatgtgtagaagtt
ttcaaggagttctaccaaacaagaacaaagcacaggaagcttacctggatttattccttg
ggcacctgcaacatcaatgccaagtttgatgcgaagcctattgaactaattgttacaaca
tatcaggctgcattgctactgctattcaatggagccgacaggcttagttattctgagatt
gtaactcaactaaacctgtcagatgatgatgtagtgcgcttgctccattcactctcttgt
gctaaatacaagattcttaacaaagagccagcaaacagatctatctctcccaacgatgtc
tttgagttcaattcaaaattcactgacagaatgagaagaataaagattcccctcccacct
gtcgatgagaagaaaaaagttgtcgaagatgttgacaaagacaggaggtatgcaattgat
gcgtcaattgtgcgcatcatgaagagccgtaaagttatgggtcatcagcagctagttgct
gaatgtgttgagcagctcagccgcatgttcaagcctgacttcaaagccatcaagaagagg
attgaggatctcatcacaagggactacttggagcgcgacaaggacaatgcgaacatgtac
aaatacctggcttga
DBGET
integrated database retrieval system