Panicum virgatum (switchgrass): 120667210
Help
Entry
120667210 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 7-like isoform X1
KO
K03354
anaphase-promoting complex subunit 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120667210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120667210
03036 Chromosome and associated proteins [BR:
pvir03036
]
120667210
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120667210
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120667210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_8
TPR_19
TPR_12
TPR_11
TPR_16
TPR_CcmH_CycH
PknG_TPR
TOM20_plant
Motif
Other DBs
NCBI-GeneID:
120667210
NCBI-ProteinID:
XP_039803208
LinkDB
All DBs
Position
3N:9840276..9855193
Genome browser
AA seq
561 aa
AA seq
DB search
MEAARESMAALLDAGLFASAQTLGCFLVSSAGASNDASMSMKAESLVLHGDALYGEKEFR
RALNAYKQAMQYSRSIPRQATSNIRSSVSATGRSPSPNSSNLLPFNENEVKFKIALCHSA
LCEHREALQEMEGIPSKVRTLKMNLMLGKLYRISRNSRSAVLCYKECLRQCPYVFEAITA
LAEMGLSAKEFSLLFSQAPNRGGKLPTDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLE
LMQRFPNNVHILLEIAKVEAIIGKNDEAIMNFEKARLIDPNIMTYMDEYAILLKTKSDYI
KLNKLVHDMLHIDPARPETCVALAAMWERKDERKALTYAEKSLRVDDRHITGYIMKGNLH
LSLNRPDMAVTDFRGAQELRADLRSYQGLVRAYLALAKCKDALFTAREAMKVMHQSAKAL
KLVGDVHAISSSGREKARKFYESAIRLEPGFLGAALALVDLHVAEGRNREAVMLLERYLR
QWADDSLHIKLAQVFAATNMLSDALSHYQSALRINPQNEAAKKGLERLEKQMKGVDPDAP
EEDEDNEADDIDADQDDAELL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgggagtccatggcggccctcctcgacgccggcctcttcgcctccgcc
caaacgctggggtgtttccttgtgtcgtcagcgggtgcgagcaacgatgctagcatgtcc
atgaaggcggaaagcctggtcctgcatggtgatgctttatatggagagaaagagttccgt
agggcactgaatgcatacaagcaagctatgcaatatagcagaagtatccctaggcaagca
acaagtaacatcagaagctcagtgtctgccacaggccggtcaccttctccaaattcttct
aatctcttgccattcaacgaaaacgaggtgaagttcaagattgcactttgccattctgct
ctatgtgagcaccgtgaagcacttcaagagatggagggtattccttctaaagtgagaacg
ctcaaaatgaatctgatgttagggaagctttatcgaatatcaagaaatagccgttcagct
gttctctgttataaagagtgcttgaggcaatgcccttacgtttttgaagctattacagct
ttggcggaaatggggctttctgcaaaggaattttctttattattttcacaagcaccaaat
agaggaggcaagcttccaactgactctttagatgcacaacgatggtggaatcggtatgtt
gaggcgcagtgttgcattgcttcacatgattataaaggtggccttgacatatatctagaa
ctaatgcaacgattccccaataatgtgcatatcctgctggaaattgcaaaggttgaagcg
atcataggcaagaatgatgaagcaataatgaactttgagaaggctcggttgattgaccca
aacattatgacatatatggatgagtacgcaattctcctaaaaacaaaatctgactatatc
aaactgaacaagctggtacatgatatgctgcatattgaccccgcgagaccagagacgtgt
gttgctcttgcagccatgtgggaaagaaaggatgaaagaaaagctttgacatatgcggaa
aagagccttcgagttgatgataggcatataactggttatattatgaagggcaatctgcat
ctttcattgaaccggccagatatggcagtgaccgacttcagaggagctcaagaattgagg
gctgatcttcgttcttatcaaggtttagtgcgtgcttatctagcacttgctaaatgcaaa
gatgcattattcactgcacgtgaggcaatgaaggttatgcatcagtctgcaaaagcgctc
aagctagttggtgatgttcatgcaatcagttccagtgggagagagaaggcaagaaagttc
tatgaatctgccattcgtcttgaacctggatttctcggagctgcactggccctggttgat
ctgcatgttgcggaaggacgtaacagggaggctgttatgctacttgagagatatctacga
caatgggctgatgattctctacacatcaagctggctcaagtgtttgcagcaacaaacatg
ctttctgatgcactttcacattatcaatctgcattaaggataaacccacaaaatgaagct
gcaaagaaaggattggagcgtttggagaaacaaatgaagggagtagacccagatgcacct
gaagaggatgaagataacgaggccgatgacattgatgccgaccaagatgatgctgaactg
ctgtag
DBGET
integrated database retrieval system
