KEGG T07260: 120667229

Panicum virgatum (switchgrass): 120667229

Entry

120667229         CDS       T07260

Name

(RefSeq) E3 ubiquitin-protein ligase SINA-like 7

K04506

E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]

Organism

pvir Panicum virgatum (switchgrass)

Pathway

pvir04120

Ubiquitin mediated proteolysis

Brite

KEGG Orthology (KO) [BR:pvir00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120667229
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120667229
Enzymes [BR:pvir01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120667229
Ubiquitin system [BR:pvir04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    120667229

SSDB

Motif

Pfam:

Sina_ZnF DUF4729

Other DBs

NCBI-GeneID:

120667229

NCBI-ProteinID:

XP_039803239

LinkDB

Position

3N:9979058..9982084

AA seq 214 aa
MERLLESIRVSCPNAAHGCAARPAYYDQYDHYQTCPHAPCHCPGKDCNFLGSTEALLDHF
TSAHGWPSTTKISAFETCCICLYDGFNFILADCTEDDDHFATSSSRRYLFLLNVTRQPLG
CSITVHFIGRESPSEALRCVLNYSRVLYDPRDRHKYLGSHSLQSEIDVECMDLSNGLPNP
EDCFQFVVPDSVLRKNDKKDGIHVEVRISIINLE

NT seq 645 nt +upstreamnt +downstreamnt
atggagcgcctgttggagtccatccgtgtctcatgcccgaatgcagcccatggctgtgct
gccagaccggcgtactatgatcagtatgaccactatcaaacgtgcccacacgctccgtgc
cactgcccgggcaaggactgtaacttccttggctcgacagaagcgctcctggaccacttc
accagcgcacatggctggccttccaccaccaagatcagtgcctttgagacatgctgcatc
tgcctctacgacggattcaacttcatcctcgctgactgcactgaggacgacgatcatttt
gccaccagcagcagccgtcggtacctgttcctcctgaacgtgacgcggcaaccacttggc
tgctccatcactgtgcatttcatcggtcgcgagtcaccctcagaagcactaagatgtgtg
ctcaattactcacgggtactgtatgaccctcgtgatcgtcataagtacctgggcagccat
tctctacaatctgagatcgacgtggaatgcatggatctctccaatgggctgcccaaccct
gaggactgcttccagtttgtcgtgccagattctgttcttagaaagaacgacaagaaggat
ggtatccacgtcgaagtccgtatcagcatcatcaatctggagtag

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