Panicum virgatum (switchgrass): 120667247
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Entry
120667247 CDS
T07260
Name
(RefSeq) importin subunit alpha-1b-like
KO
K15042
importin subunit alpha-6/7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120667247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120667247
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120667247
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
IBB
HEAT_2
ARM_ARMC5
Arm_3
HEAT
ZER1-like_2nd
V-ATPase_H_C
Arm_2
Adaptin_N
NopRA1
TOR1L1_N
CTNNBL
ARM_LRRK2
DUF4704
Motif
Other DBs
NCBI-GeneID:
120667247
NCBI-ProteinID:
XP_039803262
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Position
3N:complement(10294372..10299165)
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AA seq
529 aa
AA seq
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MSLRPSEREQMRKGNYKQSVDADESRRRRESQMVGIRKAKREESLQKRRHVGFPASAAGA
VPAGHSSALQQKLDGLPALVQAVLSNDPNVQLEATTQFRKLLSIERSPPIEEVISTGVVP
RFIEFLTREDHPQLQFEAAWALTNIASGTSENTKVVVESGAVPIFVKLLNSHSEDVREQA
VWALGNVAGDSPKCRDLVLGHGGLFPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFD
QVKPALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSA
SVLIPALRTVGNIVTGDDLQTQCVIDHQALPCLLNLLTTNHKKSIKKEACWTISNITAGN
KEQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVGQGCIKPLC
DLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDVNVYAQMIDDAEGLDKIENLQSHDN
TEIYEKAVKMLESYWLEEEDDAMPSGENPQNGFNFGNQPSVPSGGFNFG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccggccgagcgagcgggagcagatgcggaagggcaactacaagcagtcggtg
gacgcggacgagagccgccgccgccgcgagagtcagatggtgggcatccgcaaggccaag
cgcgaggagagcctccagaagaggcgccacgtcgggttccccgcctccgctgccggcgcc
gtgccggcgggacactcctcggcgctccagcagaagctcgatggattgccggcgttggtg
caggcggtgctctccaacgaccccaacgtgcagctggaggccaccacgcagttcaggaag
ctgctctccatcgagcgtagtcctccaattgaagaggttatcagcacaggagtggtgcct
cggtttattgagttcctcacacgtgaggaccatccccaactccagtttgaggctgcttgg
gcactcaccaacattgcatctggcacatcagagaacaccaaggtggtggttgagagtggt
gctgtgcccatctttgtcaagctcctcaactcccacagcgaggatgtccgcgagcaggct
gtatgggctctagggaatgttgctggtgactccccaaaatgccgtgatctcgtgcttggc
cacggtgggttattccctttgctgcagcagcttaatgagcatgccaaactctcaatgctc
aggaatgccacatggactctatccaacttctgccgtgggaagccacaaccaaacttcgat
caggtcaaaccagctctgtcagcactgcagcgtctcatccactctcaggatgaggaggtc
ctaactgatgcctgctgggctctctcatacctctctgatggaactaatgacaagatccaa
gctgtgatcgaatctggcgtgttcccacgccttgtagaacttctaatgcacccttcggcc
tcagtgctcattccagctctgcgcaccgtgggcaacattgtaactggggatgatttgcag
actcagtgtgtcatcgatcaccaagcgcttccatgccttttgaacctcttgactaccaac
cacaagaaaagcatcaagaaagaagcatgctggaccatctcaaacatcacagctggtaac
aaggaacagattcaggctgtgatcaatgcgaacataattgcacctctggtgcatcttctg
caaactgctgaatttgacatcaagaaagaggctgcctgggcaatttcaaatgccacttct
ggtggcacacatgatcagattaagtaccttgttggccagggttgcatcaagccactctgt
gatctgctcgtttgcccagaccccagaattgtcacagtttgcctggaaggtcttgagaac
atcttgaaggttggggaagcagagaagaatcttggggcaggtgatgtgaatgtgtatgca
cagatgattgatgatgctgagggcctggacaagattgagaaccttcagagccatgacaac
actgagatatatgagaaggcagtcaagatgctcgaatcctactggttggaggaggaagat
gatgccatgccctcaggcgaaaatcctcagaatggcttcaacttcgggaaccagccttct
gttccatcgggtggattcaactttggctga
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