Panicum virgatum (switchgrass): 120667295
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Entry
120667295 CDS
T07260
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120667295
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120667295
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120667295
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120667295
Enzymes [BR:
pvir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
120667295
Amino acid related enzymes [BR:
pvir01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120667295
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120667295
Prokaryotic type
Other AARSs
120667295
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120667295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
120667295
NCBI-ProteinID:
XP_039803322
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Position
3N:10772447..10779013
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AA seq
656 aa
AA seq
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MRALAAAASAVAAPTPARLRLRLPLAPRAPRSGHCRAASSSRLLRVSCSTTTMGDETSTS
VPAQEQEPAVGAGSVKQQLSRLVISSLRATVPEVEVEPMVEVSAKFADYQCNNAMGLWSK
IKGSGTSFKNPNAIGQAIAKNLPSSDIIESTSVAGPGFVNITLSNRWVAKKIQDMLVNGI
NTWAPILPVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVNVLRRNHVGDWG
TQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDQEFKERAQQGVVRLQGGE
EKYREAWKKICDISRSEFDLVYKRLNVELEEMGESFYNPYIPQVLAELSSKGLIQESEGA
QVIFIEGYQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFEMFFN
AAKMAGWLPDPKEKKYPKTSHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL
LQRLTENGKIVDWTDEELEQTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVY
LQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAEVVEEACTNLLPNV
VCEYLYNLSEMFTKFYTNCQVVGSPEETSRLLLCQATAVVMRQCFQLLGITPVYKL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctcgcggcagcagcaagtgcagtggcggcgcctacccccgcgcgcctccgt
ctccgcctcccgctcgcgccccgcgccccgcgctccggtcattgtagagcagcttcttcc
tccaggcttctccgggtctcctgcagcaccaccaccatgggagatgagacctcgacctcc
gttcctgcccaggagcaggaacctgctgtgggtgctgggagtgtcaagcaacagctctcc
aggctggtcatttcatccctccgggctacagttcctgaagtggaggtagaaccgatggtt
gaagtttcagcaaagtttgctgactaccagtgcaacaatgctatgggattatggtcaaag
attaaaggatctggaaccagtttcaaaaaccctaatgctattggacaggccattgcaaag
aacttgccttcctctgacattattgagtcaacatctgttgctggacctggttttgtgaat
attaccttatcaaaccgctgggttgctaagaaaatacaagatatgctcgtcaatggtatt
aatacttgggcacctattctgccagtaaagagggcagtgattgatttttcgtcaccaaac
attgcaaaggaaatgcatgttggacatttaaggtctaccataattggagatacattagca
cgcatgtttgagttctcaaatgttaatgttctgaggcgaaaccacgtgggagattggggt
acacagtttgggatgctcatagaatatctgtttgaaaaatttccaaattggcaagaaata
ggtagccaggccattggtgacctccagattttctataaagcatccaagcataggtttgac
aatgatcaagagtttaaagagagggctcaacaaggagttgttcggctacagggaggggag
gagaaatatcgagaagcatggaaaaagatttgtgacatcagcaggagcgaatttgacttg
gtgtacaaacgcctaaatgtggagcttgaagaaatgggggagagtttctataatccttat
atacctcaagtgttggcggagttgagcagcaaaggattgatccaggagagtgagggtgct
caagtaatatttatcgaaggttatcagatccctttgatagtggttaaaagagatggtggc
ttcaactatgcctcgacagacttagctgctctttggtatcggctcaatgttgagaaggca
gaatggataatatatgtgacagatgttggtcagcagcagcacttcgaaatgtttttcaat
gctgcaaagatggctggttggctcccagatccaaaggaaaagaagtatccaaaaacgagt
catgttggatttggccttgttcttgggtcagatggcaagcgcttccgtactcgtagtact
gaggttgttcgattggtagagctgcttgatgaggctaaatctcggagtaaatcagaacta
ctacagcggctcactgaaaatggtaaaattgttgactggacggatgaggaattagaacaa
acttcagaggcagttggatatggcgctgtgaagtatgctgatctgaagaacaatagattg
accaattacacatttagttttgaacagatgcttagcgataagggaaatactgctgtgtac
cttcagtatgctcatgctcgcatttgttccattattcggaaatccaacaaggatgtggaa
gagctgaaaatgagcggagccatttctcttgaccatccagatgagcgcgtcttggggctg
tatctgatccgatttgcagaggttgttgaagaggcttgcacaaatctccttccaaatgtt
gtgtgtgaatacttgtacaatctatcagaaatgttcacaaaattctataccaactgtcag
gtagttgggtcaccggaggagacgagccggctactgctttgccaagcgacggctgttgtc
atgcgtcagtgcttccagctgctcgggattacgccggtctacaagctgtaa
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