Panicum virgatum (switchgrass): 120667488
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Entry
120667488 CDS
T07260
Name
(RefSeq) putative RING-H2 finger protein ATL50
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120667488
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120667488
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120667488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_4
zf-ANAPC11
DUF3188
Motif
Other DBs
NCBI-GeneID:
120667488
NCBI-ProteinID:
XP_039803488
LinkDB
All DBs
Position
3N:6605754..6606387
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AA seq
152 aa
AA seq
DB search
MEDGENGLGFAAGNEAGFDADKERASEEVKGGTSRNDERHVARKPRMDAGGRRGCDIYDG
IDEDALFAAMYEYDDDELQSLPVVTAGRSREGEDCAVCLQSFCADEKPCSHAFQFHQDCI
SEWLRRNAVCPLCRHQLPPAEEDGNADEQVAS
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggggaaaacgggctagggtttgcggcggggaacgaggccggcttcgacgcg
gataaggagagggcgagtgaagaagtgaagggcggcacgtcacgcaacgatgaacggcac
gtggcgcggaagccgaggatggacgccggcggacgacgcggctgtgacatctacgacggc
attgacgaagatgctctgttcgccgctatgtacgagtacgacgacgatgagctgcagagc
ctgccggtggtgacggcgggccgctcgcgcgagggggaggactgcgccgtctgcctgcag
agcttctgcgctgacgagaagccctgctcccacgccttccagttccaccaagactgcatc
tccgagtggctccgccgcaacgccgtctgcccgctctgtcgccaccagctgccacccgcc
gaggaggacggcaacgccgacgagcaggttgctagctag
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integrated database retrieval system
