Panicum virgatum (switchgrass): 120667541
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Entry
120667541 CDS
T07260
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120667541
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120667541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40
BCAS3_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WDR55
ANAPC4_WD40
Beta-prop_IFT140_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
120667541
NCBI-ProteinID:
XP_039803531
LinkDB
All DBs
Position
3N:11264394..11266799
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AA seq
389 aa
AA seq
DB search
MAHAAVAAASSAVDADDTSFRLLSVSWNQDSGCFTAATTADFRVFNCAPFQESLRRVLPS
GGGGGGGYAIVEMLFRSSIFALVAVDEAGRHRVELWDDSKNKRICDITGIRSAVRAVRVS
MAYLAVVLDRTVRVYELGDLARPLWKIPTALNQRGLCCLSCHAGSGVLACPGTARGQVRV
EDLGKEQPATRLIAAHSSEIACMAMTTDGAVLATASVKGTLVRVFSAMDGTCLQEVRRGR
DQADIHGIALSPNLRWLAVCSDKGTLHVFSLRVRDAGGNQSAAAGSAVQTNTASNARSSL
SFMKGILPDYFSSEWSFAQFRLPETTRYTAAFGEQNTVMVIGMDGSFYRCGFDPVNDGKE
MVRKEYFWFLKDKDSPPIRTLKKHHDRAS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgccgccgtagccgcggcctccagtgctgtcgacgccgacgacaccagcttc
cggctgctctccgtctcctggaaccaggacagcggctgcttcaccgcggcgacgaccgcc
gacttccgcgtcttcaactgcgccccgttccaggagagcctgcgccgcgtcctccccagc
ggcggcggcggcggcggcgggtacgccatcgtcgagatgctgttccgcagcagcatcttc
gcgctggtcgccgtggacgaggccgggaggcacagggtcgagctctgggacgacagcaag
aacaagcgcatctgcgacatcaccggcatccgctccgccgtccgcgccgtccgggtgtcg
atggcctacctcgccgtcgtcctcgaccggacggtcagggtctacgagctgggcgacctg
gcgcggccgctctggaagatcccgacggcgctcaaccagcgcgggctctgctgcctctcc
tgccacgccggctccggcgtgctggcctgccccgggacggcgcgcgggcaggtccgcgtc
gaggacctgggcaaggagcagccggcgacgaggctcatcgcggcgcacagctcggagatc
gcgtgcatggcgatgaccacggacggggccgtgctggccacggccagcgtgaagggcacc
ctcgtcagggtgttcagcgccatggacgggacttgtttgcaggaggtgcgtagagggcgt
gaccaagctgacatccatggcattgcgctgtcaccgaatctgcggtggttggcggtgtgc
agcgacaaaggaaccctgcatgtcttcagcctgagagttagagatgcaggtggcaaccaa
tctgccgcagcaggttcagccgtgcaaacgaacaccgcatccaatgcaagatcatccttg
tctttcatgaaagggattctgccggactatttcagctctgaatggtcattcgcccagttt
cgtttacctgaaaccacccgctacactgcagcatttggagaacagaacactgtgatggtt
attgggatggatggaagtttctacagatgtggctttgaccctgtaaatgatggcaaggag
atggtgcggaaggaatatttctggttcctcaaggataaggactctcctccaattaggact
ttaaaaaaacatcatgatcgtgcttcatga
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