Panicum virgatum (switchgrass): 120667550
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Entry
120667550 CDS
T07260
Name
(RefSeq) chalcone--flavonone isomerase-like
KO
K01859
chalcone isomerase [EC:
5.5.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00941
Flavonoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
120667550
Enzymes [BR:
pvir01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.6 chalcone isomerase
120667550
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Motif
Pfam:
Chalcone
VUPS
PcrB
Motif
Other DBs
NCBI-GeneID:
120667550
NCBI-ProteinID:
XP_039803538
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Position
3N:complement(12114144..12115319)
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AA seq
221 aa
AA seq
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MAASSSSSVTVEGVVLPPVACPPGSSRKHFLAGGGVRGLMEAEGNFVKIAAIGVYLEDAA
VPALAGKWAGKTADELASDPTFFRDVYTGEFEKFTRVTFIWPKAVAAEEFAAKVMESRVA
YLKATGAYTDAEAAAVEEFKAAFKSHSLAPGASVLFTHSLAGVLTVAISDDSSAPGAGIA
AIENKPLCEAVLESIIGEHSISPATKQSIATRVPEILKGGA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcgtcgtcgtcgtcggtgacggtggagggcgtcgtcttgccgccagtggcc
tgcccgccgggctccagcaggaagcacttcctcgccggcggaggtgtgcgaggactaatg
gaggctgaaggcaacttcgtcaagatcgcggccatcggcgtgtacctggaggacgccgcc
gtgccggcgctggccggcaaatgggccggcaagaccgccgacgagctcgcgtcggacccc
accttcttccgcgacgtttacaccggcgagttcgagaagttcacgagggtgacgttcatc
tggccgaaggccgtggccgccgaggagttcgcggcgaaggtgatggagagccgcgtggcg
tacctgaaggccaccggcgcgtacacggacgccgaggccgcggccgttgaggagttcaag
gcggccttcaagagccatagcttggcgccgggcgcgtccgtcctcttcacccactcgctc
gccggagtcctcaccgtcgccatctccgatgactcgtcggcgccgggcgccggcatcgct
gccatagagaacaagccgctctgcgaggcggtgctggagtccatcatcggggagcacagc
atctcgccggcgaccaagcagagcatcgcgacgagggtgccagagatcctcaagggcgga
gcgtga
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