Panicum virgatum (switchgrass): 120667991
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Entry
120667991 CDS
T07260
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120667991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120667991
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120667991
SSDB
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Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120667991
NCBI-ProteinID:
XP_039803892
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All DBs
Position
3N:complement(62748905..62752294)
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AA seq
577 aa
AA seq
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MDRDEEMGHGDRSLLFIGDEDDDLGADRDGGSPPTSSDEGSFSERSDDDDRRGRGDERDA
PDDGQKGTWPQSYRQSIDMLSAVPSPTVSTLMAASPSLTKFGSSFLKAGSSFLRKGEGSA
LPLTRPLLPPSLSQLSQSSLHQPPVKQSTDSIGLPSRLPAAAHEAELPERPSRTCLKSDY
IELPPPASKCSNGQSIINGFNVLCGVGILTTAYGIKEGGWLSLLLLPLLGGSSCYTGLLL
KRCIDSSPNIETYPDIGQVAFGIFGRIFVSVVLYLELYASCVEFITLLGDSLSSVFPSAH
LTFTGINLNAHNLFAITMALAILPSVWLRNLSLLSYLSAGGVIATVTVIVCLFWVGIGEG
IGFHPSGAAVNLTHLPVAFGLYGYCYSGHSVFPNIYSSMKDRSQFPFVLLFCFTVVTIVY
AGVAVTGFLMFGESTMSQFTLNLPQQYIPSKIAIWMTIVNPYTKYALTMTPVALSIEEAL
PQRMQSYLVGMSVRTFLVLSTVAVALLFPYFALVMALLGSVFTMLVALILPCACYLSIKK
GAVPLWEIILCIIIIMIGVVCAFIGSYTSINRMISSR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgacgaggagatgggccacggcgaccggtcgctgctgttcatcggcgacgag
gacgacgacctcggcgccgaccgggacggcggctccccgccgacatcctccgacgagggc
tccttctccgagcggagcgacgacgacgaccggcgcggccgcggcgacgagcgggacgcg
cccgacgacggccagaagggcacgtggccgcagagttacaggcagtcgatcgacatgctg
agcgcggtgccgtcgccgacggtgagcacgctcatggcggcgagcccgagcctgaccaag
ttcggcagctccttcctcaaggccgggagctccttcctccggaagggggagggctcggcg
ctgccgctcaccaggccgctgctgccgccctcgctctcgcagctctcgcagtcgtcgctg
caccagccgcccgtcaagcagtccacggacagcatcggcctgccgtcgcggctgccggcg
gcggcgcacgaggccgagttgccggagcggccgtcgaggacgtgcctcaagtccgactac
atcgagctcccgccgcctgctagcaagtgcagcaacggccaatcaatcatcaatgggttc
aatgttctttgcggcgttggaattctcaccacggcttatggaatcaaggaaggaggatgg
ttaagcctcctactgctgcccttgttgggtggcagttcgtgctacaccggcttacttctg
aagagatgcatagacagttcgccaaacattgagacatacccagatattggacaagtcgct
tttggtatttttggtcgaatctttgtatcggttgttctttacctggagctttatgcgagc
tgtgtggagttcatcacgctgcttggagacagcttatcctcggtgtttccctcggcacat
ttaacttttaccggcatcaacctgaacgcgcataatctctttgcaatcacaatggccttg
gcaattcttccatcagtctggctcaggaacctcagcctcctctcatatctttctgccgga
ggtgtgatcgcaacagttacagttatcgtctgtctattctgggttggcattggagaagga
attgggttccacccttctggtgctgcagtgaacctgacccaccttccagtggcatttggt
ctttatggatactgctactcaggacactcagtttttccaaacatatattcgtcgatgaag
gatcgctcgcagtttccatttgtgctcctgttctgcttcacagtggtcacaatcgtgtat
gctggagtagccgtcacagggtttctgatgtttggcgagtccactatgtcacaattcaca
ttgaacttgccacaacagtacattccctcgaaaatcgccatttggatgacgattgtgaat
ccgtatacaaagtatgccttgacgatgacaccagtcgccttgtcgattgaggaggcgctg
cctcagaggatgcagagttacctggttggaatgtctgttagaacattccttgtcctctca
actgttgccgtggctctgctttttccatatttcgctctggtgatggcattgcttggatct
gtcttcacaatgcttgtggctctgatacttccatgtgcatgctatctctccatcaagaag
ggtgcagtacctttgtgggagatcatcctgtgcataatcatcataatgattggggtcgtt
tgtgcgttcatcggatcatacacctcgatcaaccggatgattagcagcagatag
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