Panicum virgatum (switchgrass): 120668165
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Entry
120668165 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML21
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120668165
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Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
EH
EF-hand_9
Caleosin
EF_EFCAB10_C
SPARC_Ca_bdg
AIF-1
Motif
Other DBs
NCBI-GeneID:
120668165
NCBI-ProteinID:
XP_039804011
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Position
3N:complement(39074895..39075832)
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AA seq
205 aa
AA seq
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MMAPPPLLMSAPSVSAAASSARPGTLPQMQRQGPCNGGRQRRLESQRLRRVFDLFDRDGD
GVITPTELLAALGRLGLGLDHATVPAQGAPAATCALEAVFAAYVAPGMPGLRFQDFEALH
AELAGDHGNAKEEEMREAFSVFDEDGDSYISVAELQAVLVRMGLPEAGCMARVRDMIAAA
DRDSDGRVDFDEFKAMMAGGTATDI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccgccgccgctgcttatgtccgcgccttctgtcagtgcggcggcgtcgtca
gctcggccagggacgttgccgcagatgcaacgccaagggccctgcaacggcggccggcaa
cggcggctcgagtcccagcgcctgcgccgcgtcttcgacctgttcgaccgcgatggcgac
ggcgtcatcacgcccaccgagctgttggccgcgctgggcaggctcggcctcggcctcgac
cacgccaccgttcccgcgcaaggagcgccagcggccacgtgcgcgcttgaagccgtcttc
gcggcgtacgtcgcgcctggcatgccggggctgcggttccaggacttcgaggcgctccac
gccgagctcgccggcgaccatggcaacgctaaggaggaggagatgagggaggcgttctcg
gtgttcgacgaggacggcgacagctacatctctgtcgcagagctgcaggccgtgctggta
cggatggggctgcctgaggccgggtgcatggcgcgggtgcgcgacatgatcgctgccgcc
gaccgggatagcgacgggcgcgtcgacttcgacgagttcaaggccatgatggccggtggt
acagctacagatatctag
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