Panicum virgatum (switchgrass): 120668304
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Entry
120668304 CDS
T07260
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120668304
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120668304
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120668304
03036 Chromosome and associated proteins [BR:
pvir03036
]
120668304
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120668304
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120668304
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120668304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
120668304
NCBI-ProteinID:
XP_039804020
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All DBs
Position
2K:14700411..14705357
Genome browser
AA seq
512 aa
AA seq
DB search
MMKQIFGRRKASKTADKESVGGRRHAALNQQSGSGVADLSGQQQVLSGTGHAYGSGNRAG
FQESRINDALFSSYFRPLPSIKDVPNTEKQNLLIVKLNMCCTLFDFSDPTRNIKEKKIKV
ETLMEILDYVRTANTKFPEIVVEGITKMISANLFRTLVVPPREKKVLQAFDLEEDEPLMD
PAWPHLHIVYELLLNFVQSAETDAKLAKRYVDHSFILRLLELFDSVDLRERDCLKMVLHR
IYGKFMVYRPFIRKAINNVFYQFIYETEKHNGIAELLEILGSIINGFALPLKEEHKLFLV
RTLIPLHKARCISMYHRQLSYCITQFVEKDGKLVDTIIRGIIKYWPVTNSPKEVLFLGEL
EEILEATQPSEFQKCMVPVFCQVARCFNSSHFQVAERALFLWNNDRVESLIRQNSKVILP
IILPALEKNINGHWNPAVQSLSLNVQKLFSDREPELFAECVLKYEEDKVREEELKLKQVA
AWKRLDEIASSKVTSGEAVLVSPPLPRQPSGL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcagatatttgggcggcgcaaggcgtccaaaactgcagataaggagtcggtt
ggtgggaggaggcatgcggcgttgaaccagcagtcgggttctggagttgccgacctgagt
ggccagcagcaagttttgtcgggtactgggcatgcctatggtagtggaaaccgtgcgggg
ttccaggagtcgaggataaatgatgctttgttctcttcttacttccgaccgttgccgagc
attaaggatgtgccaaatacggagaaacagaacctgctcatcgtaaagttgaacatgtgc
tgcaccctgtttgacttttcggacccgacaaggaacataaaggagaagaagataaaggtg
gaaacattgatggagatactcgattatgttagaacagctaacacaaagttccctgagatt
gttgtggagggaatcacaaaaatgatttcagcaaacttgttcaggacactggttgtccca
cccagggagaaaaaggtgctccaagcttttgatttagaagaggatgaaccattgatggac
cctgcatggccacacttgcatattgtgtatgagttgctcttgaattttgttcaatctgca
gaaactgatgctaaattggctaaacgatatgttgaccattcctttattctaaggctgctt
gagctctttgattctgtggaccttagggagagggactgccttaagatggtacttcaccgt
atctatgggaagttcatggtgtatcggccatttatccggaaggctatcaataatgtattc
taccagttcatatatgaaactgaaaagcacaatggaatagcagagctcttggaaatttta
ggaagcatcatcaatggatttgctttgccactcaaggaagagcacaaactgttccttgta
aggaccttaattccacttcacaaggcaaggtgcatttcaatgtaccaccggcagctgtct
tactgcattacacagtttgttgaaaaagatggcaagcttgtggatactattattaggggc
atcataaaatattggcctgtcacaaacagcccaaaagaagtactcttcttgggcgagttg
gaagagatactagaagcaacacaacctagcgagtttcaaaaatgtatggttcctgttttc
tgccaagttgctcgctgctttaacagctctcacttccaggttgctgagagagcattgttt
ttgtggaacaatgatcgcgtggagagtttgattaggcaaaacagtaaggtgatccttcct
atcatcttacctgccttggagaaaaatataaatgggcactggaacccggccgtgcagagc
ctcagtctgaacgtgcaaaagttgttctccgatcgcgagcctgagctgtttgctgaatgt
gtgctgaaatatgaggaagacaaagtcagagaggaggagcttaagctgaagcaggtggcg
gcatggaaacgtctagatgagattgcatcctccaaagtcacaagtggcgaggctgtcctt
gtctctccacccttgccccgccaaccttcaggcttgtag
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