Panicum virgatum (switchgrass): 120668400
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Entry
120668400 CDS
T07260
Name
(RefSeq) protein transport protein Sec61 subunit beta-like
KO
K09481
protein transport protein SEC61 subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120668400
04141 Protein processing in endoplasmic reticulum
120668400
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120668400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120668400
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvir02044
]
120668400
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
120668400
Secretion system [BR:
pvir02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120668400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec61_beta
Spore_YtfJ
Motif
Other DBs
NCBI-GeneID:
120668400
NCBI-ProteinID:
XP_039804035
LinkDB
All DBs
Position
4N:complement(45872543..45875142)
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AA seq
101 aa
AA seq
DB search
MAANGDAPARGSAAAAASLRRRRATSGAAAGGGGASSMLQFYTDEAAGRKMFPNTVLIMS
IGFVAVVAVLHVFGKLYRTVPPTSFAVTVPKKAESVKRGIL
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacggtgatgcacctgccagagggagtgcagcagcagctgcaagcctgcgc
aggcgtagagccacgagcggcgctgctgctggtggcggtggcgccagctcgatgctccag
ttctacactgatgaggctgccgggcgcaagatgttcccgaataccgttctgattatgagc
atcgggttcgtcgccgtcgttgctgtgctgcatgttttcgggaagctctaccgtaccgta
cctccaactagttttgctgttaccgtgcccaagaaagcagagtctgtcaagagaggaatc
ctgtag
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