Panicum virgatum (switchgrass): 120668434
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Entry
120668434 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120668434
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120668434
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120668434
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120668434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
DUF848
Motif
Other DBs
NCBI-GeneID:
120668434
NCBI-ProteinID:
XP_039804076
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All DBs
Position
2K:14833390..14834062
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AA seq
170 aa
AA seq
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MDNLNTHSEQANQPQGQQANGLPLDIPTSQVLDSPMIEQQSTNQTPQWFSLEQHRLQLGQ
VLQLCNEQVQVSRRQEMSLQNATLSNILTTDVLLQNVEEVDSMRLELQRIRENQETSRHA
WDQLLQVVVDANETNEALIRMFAALQQEINSHVSGPGDEASSVASRDNQD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctcaatacccattctgaacaggccaatcaacctcagggacaacaagcaaat
ggccttcctttggatataccaacaagtcaggtcttagatagtcctatgattgaacaacag
agcacaaatcagacgccgcaatggttctcccttgagcagcacaggctgcagttgggtcag
gttctccaactctgcaacgagcaggttcaggtgtcgcggcggcaggaaatgtctttacag
aacgcaactctatcaaacattctgacaactgatgtgctgctccagaacgttgaagaggta
gacagcatgcgcttagagttgcaaaggatccgagagaatcaagaaacttcacggcatgct
tgggatcaattgctgcaggttgtagttgatgcaaatgaaacgaacgaggcacttatcaga
atgtttgctgcgttgcagcaggaaataaactcacatgtttcaggccctggagatgaagca
tcaagtgtagcgagcagagacaaccaggactga
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